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S-1 Registration Statement – Transgenomic Inc.

UNITED
STATES

SECURITIES AND EXCHANGE COMMISSION

WASHINGTON, D.C. 20549

FORM S-1

REGISTRATION STATEMENT UNDER THE SECURITIES ACT OF
1933

TRANSGENOMIC, INC.

(Exact name of registrant as specified in its charter)

Delaware

3826

91-1789357

(State or other jurisdiction of

incorporation or organization)

(Primary Standard Industrial Classification Code Number)

(I.R.S. Employer

Identification Number)

12325 Emmet Street

Omaha, NE 68164

402-452-5400

(Address, including zip code, and telephone number, including
area code, of registrant’s principal executive offices)

__________________________________________

Craig J. Tuttle

President and Chief Executive Officer

12325 Emmet Street

Omaha, NE 68164

402-452-5400

(Name, address, including zip code, and telephone number,
including area code, of agent for service)

__________________________________________

Copies to:

David E. Gardels, Esq.

Husch Blackwell LLP

1620 Dodge Street, Suite 2100

Omaha, NE 68102

402-964-5000

___________________________________________

Approximate date of commencement of proposed sale to the public:
From time to time after this registration statement becomes effective.

If any of the securities being registered on this Form are to be offered on a
delayed or continuous basis pursuant to Rule 415 under the Securities Act of
1933, check the following box. 1/2

If this Form is filed to register additional securities for an offering
pursuant to Rule 462(b) under the Securities Act, check the following box and
list the Securities Act registration statement number of the earlier effective
registration statement for the same offering. ¨

If this Form is a post-effective amendment filed pursuant to Rule 462(c)
under the Securities Act, check the following box and list the Securities Act
registration statement number of the earlier effective registration statement
for the same offering. ¨


If this Form is a post-effective amendment filed pursuant to Rule 462(d)
under the Securities Act, check the following box and list the Securities Act
registration statement number of the earlier effective registration statement
for the same offering. ¨

Indicate by check mark whether the registrant is a large accelerated filer,
an accelerated filer, a non-accelerated filer, or a smaller reporting company.
See the definitions of “large accelerated filer”, “accelerated filer” and
“smaller reporting company” in Rule 12b-2 of the Exchange Act. (Check one):

Large Accelerated Filer o

Accelerated Filer x

Non-accelerated Filer o(Do not check if smaller reporting company)

Smaller Reporting Company o

__________________________________________

CALCULATION OF REGISTRATION FEE

Title of Each Class of Securities to be
Registered

Amount to be Registered
(1)

Proposed Maximum Offering Price Per
Share
(4)

Proposed Maximum Aggregate Offering
Price
(4)

Amount of Registration Fee

Common Stock, $0.01 par value per share

22,000,000(2)

$

1.30

$

28,600,000

$

3,277.56

Common Stock, $0.01 par value per share, issuable upon exercise of Warrants

11,000,000(3)

$

1.30

$

14,300,000

1,638.78

Total:

33,000,000

$

42,900,000

$

4,916.34

(1)

Pursuant to Rule 416 under the Securities Act of 1933, as amended (the
“Securities Act”), the shares being registered hereunder include such
indeterminate number of shares of our Common Stock as may be issuable with
respect to the shares being registered hereunder to prevent dilution by reason
of any stock dividend, stock split, recapitalization or other similar
transaction.

(2)

All 22,000,000 shares of Common Stock are to be offered by the selling
stockholders named herein, all of which were acquired by the selling
stockholders in a private placement. The total amount of 22,000,000 shares
includes 3,000,000 shares that were automatically issued upon the conversion of
certain convertible promissory notes described in the prospectus contained in
this registration statement.

(3)

All 11,000,000 shares of Common Stock issuable upon exercise of Warrants are
to be offered by the selling stockholders named herein, all of which were
acquired by the selling stockholders in a private placement and include
1,500,000 shares that were automatically issued upon the conversion of certain
convertible promissory notes described in the prospectus contained in this
registration statement.

(4)

Estimated solely for the purpose of calculating the registration fee pursuant
to Rule 457(c) under the Securities Act based upon the average of the ask and
bid prices per share of the Common Stock, as reported on the OTC Bulletin Board,
on March 15, 2012.

__________________________________________

The registrant hereby amends this registration statement on such date
or dates as may be necessary to delay its effective date until the registrant
shall file a further amendment which specifically states that this registration
statement shall thereafter become effective in accordance with Section 8(a) of
the Securities Act of 1933, as amended, or until the registration statement
shall become effective on such date as the Securities and Exchange Commission
acting pursuant to said Section 8(a) may determine.


The information in this prospectus is not complete and may be changed. These
securities may not be sold until the registration statement filed with the
Securities and Exchange Commission is effective. This prospectus is not an offer
to sell these securities and neither we nor the selling stockholders are
soliciting an offer to buy these securities in any state where the offer or sale
is not permitted.

Subject to Completion, Dated March 20, 2012

PRELIMINARY PROSPECTUS

33,000,000 SHARES OF COMMON STOCK

TRANSGENOMIC, INC.

This prospectus relates to the resale by the investors listed in the section
titled “Selling Stockholders”, and we refer to the investors as the selling
stockholders (the “Selling Stockholders”) of up to 33,000,000 shares of our
Common Stock, par value $.01 per share (the “Common Stock” or “Common Shares”).
The Common Shares offered consist of: (i) up to22,000,000 Common Shares and (ii)
up to 11,000,000 Common Shares issuable upon exercise of outstanding warrants
(the “Warrants”). We issued the shares of our Common Stock and Warrants in
connection with a private placement offering in February 2012. We are
registering the resale of the Common Shares and the Common Shares underlying the
Warrants as required by the Registration Rights Agreement we entered into with
the Selling Stockholders on February 2, 2012 (the “Registration Rights
Agreement”).

The Selling Stockholders may offer and sell or otherwise dispose of our
Common Shares described in this prospectus from time to time through public or
private transactions at prevailing market prices, at prices related to
prevailing market prices or at privately negotiated prices. See “Plan of
Distribution” beginning on page 9 for more information.

We will not receive any of the proceeds from the Common Stock sold by the
Selling Stockholders, other than any proceeds from the cash exercise of Warrants
to purchase shares of our Common Stock.

We have agreed to pay certain expenses in connection with this registration
statement and to indemnify the Selling Stockholders against certain liabilities.
The Selling Stockholders will pay all underwriting discounts and selling
commissions, if any, in connection with the sale of the shares of Common Stock.

Our Common Stock is traded on the OTC Bulletin Board under the symbol “TBIO.”
On March 13, 2012, the last reported sale price of our Common Stock was $1.28
per share.


Investing in the Securities involves a high degree of risk. See the section
entitled “Risk Factors” beginning on page
7
of this prospectus, and the section entitled “Risk Factors” in our most recent
Annual Report on Form 10-K for the year ended December 31, 2011 filed with the
Securities and Exchange Commission, which is incorporated herein by reference.

Neither the Securities and Exchange Commission nor any state securities
commission or other regulatory body has approved or disapproved of these
securities or passed upon the adequacy or accuracy of this prospectus. Any
representation to the contrary is a criminal offense.


The date of this prospectus is _________ __, 2012

3


TRANSGENOMIC, INC.

Index to Form S-1

About this Prospectus

5

A Warning about Forward-Looking Statements

5

Prospectus Summary

6

The Offering

7

Risk Factors

7

Use of Proceeds

8

Determination of Offering Price

9

Plan of Distribution

9

Selling Stockholders

11

Description of Common Stock

16

United States Federal Income Tax Considerations

19

Legal Matters

25

Experts

26

Where You Can Find Additional Information

26

Incorporation of Certain Information by Reference

26

4


ABOUT THIS PROSPECTUS

You should rely only on the information contained or incorporated by
reference in this prospectus. Neither we nor the Selling Stockholders have
authorized anyone to provide you with information that is different from such
information. If anyone provides you with different or inconsistent information,
you should not rely on it. The Selling Stockholders are offering to sell Common
Stock only in jurisdictions where offers and sales are permitted. The
information contained in this prospectus is accurate only as of the date on its
cover page regardless of the time of delivery of this prospectus or any sale of
the Common Stock. In case there are differences or inconsistencies between this
prospectus and the information incorporated by reference, you should rely on the
information in the document with the latest date.

The Selling Stockholders are offering the Common Stock only in jurisdictions
where such issuances are permitted. The distribution of this prospectus and the
issuance of the Common Stock in certain jurisdictions may be restricted by law.
Persons outside the United States who come into possession of this prospectus
must inform themselves about, and observe any restrictions relating to, the
issuance of the Common Stock and the distribution of this prospectus outside the
United States. This prospectus does not constitute, and may not be used in
connection with, an offer to sell, or a solicitation of an offer to buy, the
Common Stock offered by this prospectus by any person in any jurisdiction in
which it is unlawful for such person to make such an offer or solicitation.

It is important for you to read and consider all of the information contained
in this prospectus in making your investment decision. To understand the
offering fully and for a more complete description of the offering you should
read this entire document carefully, including particularly the “Risk Factors”
section beginning on page
7.
You also should read and consider the information in the documents to which we
have referred you in the sections entitled “Where You Can Find Additional
Information” and “Incorporation of Certain Information by Reference”.

As used in this prospectus, unless the context requires otherwise, the terms
“we”, “us”, “our”, or “the Company” refer to Transgenomic, Inc. and its
subsidiaries on a consolidated basis. References to “Selling Stockholders”
refers to those stockholders listed herein under “Selling Stockholders” and
their successors, assignees and permitted transferees.

A WARNING ABOUT FORWARD-LOOKING STATEMENTS

This prospectus contains forward-looking statements within the meaning of
Section 27A of the Securities Act of 1933, as amended (the “Securities Act”),
and Section 21E of the Securities Exchange Act of 1934, as amended (the
“Exchange Act”), about the Company and its subsidiaries. These forward-looking
statements are intended to be covered by the safe harbor for forward-looking
statements provided by the Private Securities Litigation Reform Act of 1995.
Forward-looking statements are not statements of historical fact, and can be
identified by the use of forward-looking terminology such as “believes”,
“expects”, “may”, “will”, “could”, “should”, “projects”, “plans”, “goal”,
“targets”, “potential”, “estimates”, “pro forma”, “seeks”, “intends”, or
“anticipates” or the negative thereof or comparable terminology. Forward-looking
statements include discussions of strategy, financial projections, guidance and
estimates (including their underlying assumptions), statements regarding plans,
objectives, expectations or consequences of various transactions, and statements
about the future performance, operations, products and services of the Company
and its subsidiaries. We caution our stockholders and other readers not to place
undue reliance on such statements.

Our businesses and operations are and will be subject to a variety of risks,
uncertainties and other factors. Consequently, actual results and experience may
materially differ from those contained in any forward-looking statements. Such
risks, uncertainties and other factors that could cause actual results and
experience to differ from those projected include, but are not limited to, the
risk factors set forth in the section entitled “Risk Factors” beginning on page
7 of this prospectus and elsewhere in the documents incorporated by reference in
this prospectus, including our Annual Report on Form 10-K for the year ended
December 31, 2011.

All written or oral forward-looking statements attributable to us or any
person acting on our behalf made after the date of this prospectus are expressly
qualified in their entirety by the risk factors and cautionary statements
contained in and incorporated by reference into this prospectus. Unless legally
required, we do not undertake any obligation to release publicly any revisions
to such forward-looking statements to reflect events or circumstances after the
date of this prospectus or to reflect the occurrence of unanticipated events.

5


The Offering

PROSPECTUS SUMMARY

The following summary highlights selected information contained elsewhere
in this prospectus and in the documents incorporated by reference in this
prospectus and does not contain all the information you will need in making your
investment decision. You should read carefully this entire prospectus and the
documents incorporated by reference in this prospectus before making an
investment decision. This prospectus provides you with a general description of
Transgenomic, the Common Stock issuable under this prospectus and the offering.

Business

Transgenomic, Inc. is a global biotechnology company advancing personalized
medicine in the detection and treatment of cancer and inherited diseases through
its proprietary molecular technologies and world-class clinical and research
services. Our operations are organized and reviewed by management along its
product lines and presented in the three complementary business segments.

Clinical Laboratories. Our clinical laboratories specialize in genetic
testing for cardiology, neurology, mitochondrial disorders, and oncology.
Located in New Haven, Connecticut and Omaha, Nebraska the molecular clinical
reference laboratories are certified under the Clinical Laboratory Improvement
Amendment (CLIA) as high complexity labs and our Omaha facility is also
accredited by the College of American Pathologists (CAP).

Pharmacogenomics Services. Our Contract Research Organization located in
Omaha, Nebraska provides pharmacogenomics research services supporting Phase II
and Phase III clinical trials conducted by our pharmaceutical customers. This
lab specializes in pharmacogenomic, biomarker and mutation discovery research
serving the pharmaceutical and biomedical industries worldwide for disease
research, drug and diagnostic development and clinical trial support.

Diagnostic Tools. Our proprietary product is the WAVE ® System
which has broad applicability to genetic variation detection in both molecular
genetic research and molecular diagnostics. There is a worldwide installed base
of over 1,500 WAVE Systems as of December 31, 2011. We also distribute
bioinstruments produced by other manufacturers (“OEM Equipment”) through our
sales and distribution network. Service contracts to maintain installed systems
are sold and supported by our technical support personnel. The installed WAVE
base and some OEM Equipment platforms generate a demand for consumables that are
required for the continued operation of the bioinstruments. We develop,
manufacture and sell these consumable products. In addition, we manufacture and
sell consumable products that can be used on multiple, independent platforms.
These products include SURVEYOR ® Nuclease and a range of
chromatography columns.

For a complete description of our business, financial condition, results of
operations and other important information, we refer you to our filings with the
Securities and Exchange Commission (the “SEC”) that are incorporated by
reference in this prospectus, including our Annual Report on Form 10-K for the
year ended December 31, 2011. For instructions on how to find copies of these
documents, see “Where You Can Find Additional Information”.

We were incorporated in Delaware on March 6, 1997. Our principal office is
located at 12325 Emmet Street, Omaha, Nebraska 68164 and our telephone phone
number is 402-452-5400. Our website address is www.transgenomic.com.
Information on our website, or that can be accessed through our website, is not
incorporated by reference into this prospectus and does not constitute part of
this prospectus.

6


The Offering

Issuer

Transgenomic, Inc.

Common Stock outstanding

71,625,725 Common Shares(1)

Common Stock, offered by the selling stockholders

33,000,000 Common Shares(2)

Common Stock outstanding after the offering

82,625,725 Common Shares(3)

Use of proceeds

We will not receive any proceeds from the sale of the Common Shares. We may,
however, receive cash proceeds upon the cash exercise of Warrants, and we intend
to use any such proceeds for general corporate and working capital purposes. See
“Use of Proceeds” beginning on
page
8
of this prospectus.

Listing

Our Common Stock is listed on the OTC Bulletin Board under the symbol “TBIO”.

Risk Factors

You should consider carefully the matters set forth under “Risk Factors”
beginning on
page
7
of this prospectus before deciding to purchase any of the Common Stock.

(1)

The number of shares shown to be outstanding is based on the number of shares
of our Common Stock outstanding as of March 13, 2012, and does not include
shares issuable upon exercise of warrants (including the shares of Common Stock
underlying Warrants registered hereunder), shares issuable upon conversion of
the outstanding shares of our Series A Convertible Preferred Stock into shares
of Common Stock or shares issuable upon exercise of outstanding options to
acquire Common Stock.

(2)

The number of shares shown to be registered hereunder includes 22,000,000
shares of Common Stock outstanding and 11,000,000 shares of Common Stock
issuable upon exercise of Warrants.

(3)

The number of shares outstanding after the offering assumes full cash
exercise by the Selling Stockholders of the 11,000,000 shares of Common Stock
issuable upon exercise of Warrants being registered hereunder and includes the
Common Shares issuable upon exercise of the Warrants, but excludes shares
issuable upon exercise of other warrants, shares issuable upon conversion of the
outstanding shares of our Series A Convertible Preferred Stock into shares of
Common Stock and shares issuable upon exercise of outstanding options to acquire
Common Stock.

RISK FACTORS

Ownership of the Common Stock involves certain risks. You should consider
carefully the risks and uncertainties described in, or incorporated by reference
in, this prospectus, including the risks described below and under the caption
“Risk Factors” in our Annual Report on Form 10-K for the year ended December 31,
2011, and in any other reports that we file with the SEC, along with the other
information included or incorporated by reference in this prospectus, in
evaluating an investment in the Common Stock. The information included or
incorporated by reference in this prospectus may be amended, supplemented or
superseded from time to time by other reports we file with the SEC in the
future. For a description of these reports and documents, and information about
where you can find them, see the sections entitled “Where You Can Find
Additional Information” and Incorporation of Certain Information by Reference”
in this prospectus.

The risks and uncertainties described in this prospectus and the documents
incorporated by reference in this prospectus are not the only ones facing us.
Additional risks and uncertainties that we do not presently know about or that
we current believe are not material may also adversely affect our business. If
any of the risks and uncertainties described in this prospectus or the documents
incorporated by reference herein actually occur, our business, financial
condition and results of operations could be adversely affected in a material
way. This could cause the trading price of our Common Stock to decline, perhaps
significantly, and you may lose part or all of your investment.

7


Our Common Stock is equity and therefore is subordinate to our
indebtedness and preferred stock.

Our Common Stock is an equity interest and does not constitute indebtedness
of the Company. Consequently, our Common Stock ranks junior to all current and
future indebtedness of the Company and other non-equity claims against us with
respect to assets available to satisfy claims against us, including in the event
of our liquidation or dissolution. We may, and our other subsidiaries may also,
incur additional indebtedness from time to time and may increase our aggregate
level of outstanding indebtedness.

Further, holders of our Common Stock are subject to the prior dividend and
liquidation rights of any holders of our preferred stock that may be outstanding
from time to time. Our Board of Directors has designated 3,879,307 shares of our
authorized preferred stock as Series A Convertible Preferred Stock (the “Series
A Preferred”) with certain rights, privileges and preferences which are senior
to the rights of the holders of our Common Stock. Our Board of Directors is
authorized to cause us to issue additional classes or series of preferred stock
without any action on the part of our common stockholders. If we issue
additional shares of Series A Preferred or other preferred shares in the future
that have a preference over our Common Stock with respect to the payment of
dividends or upon liquidation, or if we issue preferred shares with voting
rights that dilute the voting power of our Common Stock, then the rights of
holders of our Common Stock or the market price of our Common Stock could be
adversely affected.

Sales of our shares issued in our recent private placement may
cause the market price of our shares to decline.

On February 7, 2012, we issued 22,000,000 shares of Common Stock and Warrants
to purchase an additional 11,000,000 shares of Common Stock to investors.
Pursuant to the Registration Rights Agreement with the Selling Stockholders, we
are registering with the SEC 33,000,000 of those shares and warrant shares for
resale as described in this prospectus. The shares issued on February 7, 2012
represent approximately 40% of our issued and outstanding shares of Common
Stock, assuming full cash exercise of the Warrants. Upon effectiveness of this
registration statement of which this prospectus is a part, these shares may be
freely sold in the open market. The sale of a significant amount of shares in
the open market, or the perception that these sales may occur, could cause the
trading price of our Common Stock to decline or become highly volatile.

Our ability to use our net operating losses to offset future
taxable income will be subject to certain limitations.

In general, under Section 382 of the Internal Revenue Code of 1986, as
amended, or the Internal Revenue Code, a corporation that undergoes an
“ownership change” is subject to limitations on its ability to utilize its
pre-ownership change net operating losses, or NOLs, to offset future taxable
income. Our existing NOLs will be subject to limitations arising from previous
ownership changes, and if we undergo an ownership change in the future, our
ability to utilize NOLs could be further limited by Section 382 of the Internal
Revenue Code. Furthermore, our ability to utilize NOLs of any companies that we
may acquire in the future may be subject to limitations. As a result, if we earn
net taxable income, our ability to use our pre-change net operating loss
carryforwards to offset U.S. federal taxable income will be subject to
limitations, which could potentially result in increased future tax liability to
us. The purchase of our Common Stock pursuant to this offering or acquisition of
our Common Stock upon Warrant exercise could potentially cause, or increase the
risk of, an ownership change that triggers the Section 382 limitation upon the
utilization of our NOLs.

Non-U.S. holders may be subject to U.S. income tax with respect
to gain on disposition of their Common Stock or Warrants.

If we are or have been a U.S. real property holding corporation at any time
within the shorter of the five-year period preceding a disposition of Common
Stock or a warrant by a non-U.S. holder or such holder’s holding period of the
stock disposed of, such non-U.S. holder may be subject to United States federal
income tax with respect to gain on such disposition. We believe that we are not
currently, and do not anticipate becoming, a “United States real property
holding corporation” for U.S. federal income tax purposes. Even if we are
considered a U.S. real property holding corporation, an additional exception may
exempt a non-U.S. holder’s gain on disposition of our Common Stock or Warrants
from United States federal income tax. See section entitled “United States
Federal Income Tax Considerations” for further information.

USE OF PROCEEDS

We will receive no proceeds from the sale of the Common Shares by the Selling
Stockholders. We may, however, receive cash proceeds equal to the total exercise
price of any Warrants to the extent that the Warrants are exercised. The
exercise price of the Warrants held by the Selling Stockholders is $1.25 per
share of our Common Stock. The exercise price and the number of Common Shares
issuable upon exercise of the Warrants may be adjusted in certain circumstances,
including stock splits, dividends, distributions or reclassifications, and
mergers, consolidations, statutory share exchanges, or other similar
transactions. However,

8


these Warrants contain a “cashless exercise” feature that allows the holders,
under certain circumstances, to exercise the Warrants without making a cash
payment to us. There can be no assurance any of these Warrants will be exercised
by the Selling Stockholders at all or that these Warrants will be exercised for
cash rather than pursuant to the “cashless exercise” feature. To the extent we
receive proceeds from the cash exercise of the Warrants, we may use such
proceeds to provide capital support or for general corporate purposes, which may
include, without limitation, supporting asset growth and engaging in
acquisitions or other business combinations. We do not have any specific plans
for acquisitions or other business combinations at this time. Our management
will retain broad discretion in the allocation of the net proceeds from the
exercise of the Warrants.

We will pay certain expenses related to the registration of the shares of
Common Stock.

DETERMINATION OF OFFERING PRICE

The Selling Stockholders will determine at what price they may sell the
offered shares, and such sales may be made at prevailing market prices, or at
privately negotiated prices

PLAN OF DISTRIBUTION

We are registering the shares of Common Stock previously issued to the
Selling Stockholders and issuable upon exercise of the Warrants previously
issued to the Selling Stockholders to permit the resale of these shares of
Common Stock by the holders of the Common Stock and Warrants from time to time
after the date of this prospectus. We will not receive any of the proceeds from
the sale by the Selling Stockholders of the shares of Common Stock. We will bear
all fees and expenses incident to our obligation to register the shares of
Common Stock.

The Selling Stockholders, or their pledges, donees, transferees, or any of
their successors in interest selling shares received from a Selling Shareholder
as a gift, partnership distribution or other non-sale related transfer after the
date of this prospectus, may sell all or a portion of the shares of Common Stock
beneficially owned by them and offered hereby from time to time directly or
through one or more underwriters, broker-dealers or agents. If the shares of
Common Stock are sold through underwriters or broker-dealers, the Selling
Stockholders will be responsible for underwriting discounts or commissions or
agent’s commissions. The shares of Common Stock may be sold in one or more
transactions at fixed prices, at prevailing market prices at the time of the
sale, at varying prices determined at the time of sale, or at negotiated prices.
The Selling Stockholders will act independently of us in making decisions with
respect to the timing, manner and size of each sale. These sales may be affected
in transactions, which may involve crosses or block transactions,

on any national securities exchange or quotation service on which the
securities may be listed or quoted at the time of sale;

in the over-the-counter market;

in transactions otherwise than on these exchanges or systems or in the
over-the-counter market;

through the writing of options, whether such options are listed on an options
exchange or otherwise;

ordinary brokerage transactions and transactions in which the broker-dealer
solicits purchasers;

block trades in which the broker-dealer will attempt to sell the shares as
agent but may position and resell a portion of the block as principal to
facilitate the transaction;

purchases by a broker-dealer as principal and resale by the broker-dealer for
its account;

an exchange distribution in accordance with the rules of the applicable
exchange;

privately negotiated transactions;

short sales;

through the distribution of the Common Stock by any Selling Stockholders to
its partners, members or stockholders;

through one or more underwritten offerings on a firm commitment or best
efforts basis;

sales pursuant to Rule 144;

broker-dealers may agree with the Selling Stockholders to sell a specified
number of such shares at a stipulated price per share;

a combination of any such methods of sale; and

any other method permitted pursuant to applicable law.

The Selling Shareholders may also transfer the Common Shares by gift.

9


The Selling Shareholders may engage brokers and dealers, and any brokers or
dealers may arrange for other brokers or dealers to participate in effecting
sales of the Common Shares. These brokers, dealers or underwriters may act as
principals, or as an agent of a Selling Shareholder. Broker-dealers may agree
with a Selling Shareholder to sell a specified number of the Common Shares at a
stipulated price per security. If the broker-dealer is unable to sell the Common
Shares acting as agent for a Selling Shareholder, it may purchase as principal
any unsold Common Shares at the stipulated price. Broker-dealers who acquire
Common Shares as principals may thereafter resell the Common Shares from time to
time in transactions in any stock exchange or automated interdealer quotation
system on which the Common Shares are then listed, at prices and on terms then
prevailing at the time of sale, at prices related to the then-current market
price or in negotiated transactions. Broker-dealers may use block transactions
and sales to and through broker-dealers, including transactions of the nature
described above. The Selling Shareholders may also sell the Common Shares in
accordance with Rule 144 under the Securities Act of 1933, as amended, rather
than pursuant to this prospectus, regardless of whether the Common Shares are
covered by this prospectus

If the Selling Stockholders effect such transactions by selling shares of
Common Stock to or through underwriters, broker-dealers or agents, such
underwriters, broker-dealers or agents may receive commissions in the form of
discounts, concessions or commissions from the Selling Stockholders or
commissions from purchasers of the shares of Common Stock for whom they may act
as agent or to whom they may sell as principal (which discounts, concessions or
commissions as to particular underwriters, broker-dealers or agents may be in
excess of those customary in the types of transactions involved). In connection
with sales of the shares of Common Stock or otherwise, the Selling Stockholders
may enter into hedging transactions with broker-dealers, which may in turn
engage in short sales of the shares of Common Stock in the course of hedging in
positions they assume. The Selling Stockholders may also sell shares of Common
Stock short and deliver shares of Common Stock covered by this prospectus to
close out short positions and to return borrowed shares in connection with such
short sales. The Selling Stockholders may also loan or pledge shares of Common
Stock to broker-dealers that in turn may sell such shares.

The Selling Stockholders may pledge or grant a security interest in some or
all of the shares of Common Stock or Warrants owned by them and, if they default
in the performance of their secured obligations, the pledgees or secured parties
may offer and sell the shares of Common Stock from time to time pursuant to this
prospectus or any amendment to this prospectus under Rule 424(b)(3) or other
applicable provision of the Securities Act amending, if necessary, the list of
Selling Stockholders to include the pledgee, transferee or other successors in
interest as Selling Stockholders under this prospectus. The Selling Stockholders
also may transfer and donate the shares of Common Stock in other circumstances
in which case the transferees, donees, pledgees or other successors in interest
will be the selling beneficial owners for purposes of this prospectus.

In addition, a Selling Shareholder may, from time to time, sell the Common
Shares short, and, in those instances, this prospectus may be delivered in
connection with the short sales and the Common Shares offered under this
prospectus may be used to cover short sales.

The Selling Stockholders and any broker-dealer participating in the
distribution of the shares of Common Stock may be deemed to be “underwriters”
within the meaning of the Securities Act, and any commission paid, or any
discounts or concessions allowed to, any such broker-dealer may be deemed to be
underwriting commissions or discounts under the Securities Act. At the time a
particular offering of the shares of Common Stock is made, a prospectus
supplement, if required, will be distributed which will set forth the aggregate
amount of shares of Common Stock being offered and the terms of the offering,
including the name or names of any broker-dealers or agents, any discounts,
commissions and other terms constituting compensation from the Selling
Stockholders and any discounts, commissions or concessions allowed or reallowed
or paid to broker-dealers. The Selling Stockholders may indemnify any
broker-dealer that participates in transactions involving the sale of the shares
of Common Stock against certain liabilities, including liabilities arising under
the Securities Act.

Under the securities laws of some states, the shares of Common Stock may be
sold in such states only through registered or licensed brokers or dealers. In
addition, in some states the shares of Common Stock may not be sold unless such
shares have been registered or qualified for sale in such state or an exemption
from registration or qualification is available and is complied with.

There can be no assurance that any Selling Stockholder will sell any or all
of the shares of Common Stock registered pursuant to the registration statement,
of which this prospectus forms a part.

The Selling Stockholders and any other person participating in such
distribution will be subject to applicable provisions of the Exchange Act and
the rules and regulations thereunder, including, without limitation, Regulation
M of the Exchange Act, which may limit the timing of purchases and sales of any
of the shares of Common Stock by the Selling Stockholders and any other
participating person. Regulation M may also restrict the ability of any person
engaged in the distribution of the shares of Common Stock to engage in
market-making activities with respect to the shares of Common Stock. All of the
foregoing may affect the marketability of the shares of Common Stock and the
ability of any person or entity to engage in market-making activities

10


with respect to the shares of Common Stock.

We will pay all expenses of the registration of the shares of Common Stock
pursuant to the Registration Rights Agreement, estimated to be $54,316 in total,
including, without limitation, SEC filing fees and expenses of compliance with
state securities or “Blue Sky” laws; provided, however, that a
Selling Stockholder will pay all underwriting discounts and selling commissions,
if any. We will indemnify the Selling Stockholders against liabilities,
including some liabilities under the Securities Act, in accordance with the
Registration Rights Agreement, or the Selling Stockholders will be entitled to
contribution. We may be indemnified by the Selling Stockholders against civil
liabilities, including liabilities under the Securities Act, that may arise from
any written information furnished to us by the selling stockholder specifically
for use in this prospectus, in accordance with Registration Rights Agreement, or
we may be entitled to contribution.

Once sold under the registration statement, of which this prospectus forms a
part, the shares of Common Stock will be freely tradable in the hands of persons
other than our affiliates.

SELLING STOCKHOLDERS

We have prepared this prospectus to allow the Selling Stockholders or their
successors, assignees or other permitted transferees to sell or otherwise
dispose of, from time to time, up to 33,000,000 shares of our Common Stock. The
33,000,000 shares includes the following: (i) 19,000,000 shares of our Common
Stock issued pursuant to the Securities Purchase Agreement dated February 2,
2012 (the “Securities Purchase Agreement”); (ii) 9,500,000 shares of Common
Stock issuable upon exercise of five-year Warrants with an exercise price of
$1.25 issued pursuant to the Securities Purchase Agreement; (iii) 3,000,000
shares of Common Stock issued to the entities associated with Third Security,
LLC (the “Third Security Entities”) in connection with the conversion of the
convertible notes issued by us; and (iv) 1,500,000 shares of Common Stock
issuable to the Third Security Entities upon exercise of Warrants on the same
terms as the investors in the above-described private placement.

The table below presents information regarding the Selling Stockholders and
the shares of our Common Stock that they may sell or otherwise dispose of from
time to time under this prospectus. The table is based on information supplied
to us by the Selling Stockholders. Percentages of beneficial ownership are based
upon 98,142,953 shares of Common Stock issued and outstanding as of March 13,
2012. Beneficial ownership is determined under Section 13(d) of the Exchange Act
and generally includes voting or investment power with respect to securities and
including any securities that grant the Selling Stockholders the right to
acquire Common Stock within 60 days of March 13, 2012. We do not know when or in
what amounts the Selling Stockholders may sell or otherwise dispose of the
shares covered hereby. The Selling Stockholders might not sell any or all of the
shares covered by this prospectus or may sell or dispose of some or all of the
shares other than pursuant to this prospectus. Because the Selling Stockholders
may not sell or otherwise dispose of some or all of the shares covered by this
prospectus and because there are currently no agreements, arrangements or
understandings with respect to the sale or other disposition of any of the
shares, we cannot estimate the number of the shares that will be held by the
Selling Stockholders after completion of the offering.

Except as provided below, none of the Selling Stockholders has held any
position or office or had any other material relationship with us or any of our
predecessors or affiliates within the past three years other than as a result of
the ownership of our securities.

Name of Selling Stockholder

Number of Shares of Common Stock Owned Prior to
Offering
(1)

Maximum Number of Shares of Common Stock to be Offered
Pursuant to this Prospectus

Number of Shares of Common Stock Owned After
Offering
(2)

Number

Number

Number

Percent

James E. Douglas III(3)

600,000

600,000

:

:

%

K & M Douglas TR u/a dtd 3/23/06. Kevin and Michelle Douglas
TTEES(3)

2,400,000

2,400,000

:

:

%

11


Douglas Irrev Descendants TR u/a dtd 8/7/98 Kevin & Michelle Douglas
TTEES(3)

1,980,000

1,980,000

:

:

%

Douglas Family TR u/a dtd 1/29/90 James and Jean Douglas TTEES(3)

1,020,000

1,020,000

:

:

%

Special Situations Fund II QP, L.P.(4)

2,625,000

2,625,000

:

:

%

Special Situations Private Equity Fund, L.P.(4)

1,125,000

1,125,000

:

:

%

Special Situations Life Sciences Fund, L.P.(4)

1,500,000

1,500,000

:

:

%

Third Security Incentive 2010 LLC (5)

4,052,626

900,000

3,152,626

3

%

Third Security Staff 2010 LLC (5)

8,105,252

1,800,000

6,305,252

6

%

Third Security Senior Staff 2008 LLC (5)

8,105,252

1,800,000

6,305,252

6

%

Fidelity Select Portfolios: Biotechnology Portfolio(6)

4,257,000

4,257,000

:

:

%

Fidelity Advisor Series VII: Fidelity Advisor Biotechnology
Fund(6)

243,000

243,000

:

:

%

Perceptive Life Sciences Master Fund Ltd.(7)

3,000,000

3,000,000

:

:

%

Burguete Investment Partnership, LP(8)

1,500,000

1,500,000

:

:

%

Robert G. Allison

255,000

255,000

:

:

%

William H. Baxter Trustee FBO William H. Baxter Revocable Trust u/a dtd
7/3/96

60,000

60,000

:

:

%

Gary A. Bergren

90,000

90,000

:

:

%

David & Carole Brown TTEES FBO David & Carole Brown Rev Tr u/a dtd
10/23/97

52,500

52,500

:

:

%

Dennis D. Gonyea

60,000

60,000

:

:

%

Dorothy J. Hoel

60,000

60,000

:

:

%

Dr. Paul & Nancy Seel JtRos

60,000

60,000

:

:

%

E. Terry Skone TTEE E. Terry Skone Rev TR u/a dtd 11/30/05

60,000

60,000

:

:

%

Janet & Donald Voight TTEES FBO Janet M Voight TR u/a dtd 8/28/96

52,500

52,500

:

:

%

Kettle Hill Master Fund, Ltd(9)

274,500

274,500

:

:

%

Kettle Hill Partners II, LP(9)

148,500

148,500

:

:

%

Kettle Hill Partners, LP(9)

327,000

327,000

:

:

%

Capital Ventures International(10)

750,000

750,000

:

:

%

DAFNA Lifescience LTD(11)

247,500

247,500

:

:

%

DAFNA Lifescience Market Neutral LTD(11)

202,500

202,500

:

:

%

DAFNA Lifescience Select LTD(11)

300,000

300,000

:

:

%

Aristides Fund LP(12)

600,000

600,000

:

:

%

Pennington Capital LLC(13)

560,000

450,000

110,000

:

%

Itasca Capital Partners, LLC(14)

405,000

375,000

30,000

:

%

L2 Opportunity Fund(15)

375,000

375,000

:

:

%

FT Options, LLC(16)

375,000

375,000

:

:

%

Brian H. Davidson

375,000

375,000

:

:

%

Iroquois Master Fund, Ltd.(17)

300,000

300,000

:

:

%

MLPF&S FPO Gary S. Kohler RRA FBO Gary S. Kohler

300,000

300,000

:

:

%

Kingsbrook Opportunities Master Fund LP(18)

300,000

300,000

:

:

%

12


Cranshire Capital Master Fund, Ltd.(19)

210,000

210,000

:

:

%

Freestone Advantage Partners II, LP(20)

15,000

15,000

:

:

%

Midsummer Small Cap Master, Ltd.(21)

225,000

225,000

:

:

%

Lacuna Hedge Fund LLLP(22)

187,500

187,500

:

:

%

Doit L. Koppler II (23)

107,500

52,500

55,000

:

%

Robert M. Patzig (24)

92,500

37,500

55,000

:

%

Theodore J. Fisher (25)

22,500

22,500

:

:

%

MLPF&S FPO Michael John Qualen IRA FB(26)

150,000

150,000

:

:

%

Craig-Hallum Capital Group 401k Bradley W. Baker Roth 401k
Acct.(27)

30,000

30,000

:

:

%

Bradley W. Baker(27)

150,000

150,000

:

:

%

George F. Sutton(28)

77,500

37,500

40,000

:

%

James H. Zavoral, Jr. and Johanna M. Zavoral(29)

97,500

97,500

:

:

%

Craig-Hallum Capital Group 401k UTD 5/30/02 Contribution Acct A/C William F.
Hartfiel II(30)

150,000

150,000

:

:

%

John L. Flood(31)

90,000

90,000

:

:

%

MLPF&S Cust FPO John L. Flood IRRA FBO John L. Flood(31)

90,000

90,000

:

:

%

Kevin P. Harris(32)

180,000

180,000

:

:

%

MLPF&S Cust FPO Michael J. Hasslinger IRRA FBO Michael J.
Hasslinger(33)

75,000

75,000

:

:

%

: Represents less than 1%

(1)

The number of shares for each Selling Stockholder consists of the aggregate
of the number of shares of Common Stock held by such Selling Stockholder and
shares of Common Stock issuable upon exercise of Warrants held by such Selling
Stockholder.

(2)

For purposes of this table, the Company assumes that all of the shares
covered by this prospectus will be sold by the Selling Stockholders.

(3)

Kevin Douglas and his wife, Michelle Douglas, hold shares jointly as the
beneficiaries and co-trustees of the K&M Douglas Trust. In addition, Kevin
Douglas and Michelle Douglas are co-trustees of the James Douglas and Jean
Douglas Irrevocable Descendants’ Trust. Kevin Douglas also has dispositive power
with respect to the shares held by the Douglas Family Trust and the shares held
by James E. Douglas III.

(4)

MGP Advisors Limited (“MGP”) is the general partner of the Special Situations
Fund III, QP, L.P. AWM Investment Company, Inc. (“AWM”) is the general partner
of MGP and the investment adviser to the Special Situations Fund III, QP, L.P.,
Special Situations Private Equity Fund, L.P. and Special Situations Life
Sciences Fund, L.P. Austin W. Marxe and David M. Greenhouse are the principal
owners of MGP and AWM. Through their control of MGP and AWM, Messrs. Marxe and
Greenhouse share voting and investment control over the portfolio securities of
each of the funds listed above.

(5)

Randal J. Kirk makes investment and voting decisions with respect to shares
held by the Third Security Entities. The Third Security Entities are the holders
of all of the shares outstanding of our Series A Preferred and the amount of
securities beneficially owned by each of the Third Security Entities includes
shares of Common Stock issuable upon conversion of the outstanding shares of
Series A Preferred and the conversion of shares of Series A Preferred issuable
upon exercise of warrants for shares of Series A Convertible Preferred Stock.
The holders of Series A Preferred have the right to appoint two members to our
Board of Directors.

(6)

Fidelity Management & Research Company (“Fidelity”), 82 Devonshire
Street, Boston, Massachusetts 02109, a wholly-owned subsidiary of FMR LLC and an
investment adviser registered under Section 203 of the Investment Advisers Act
of 1940, is the beneficial owner of 4,500,000 shares of the Company as a result
of acting as investment adviser to various investment companies registered under
Section 8 of the Investment Company Act of 1940.

13


Edward C. Johnson 3d and FMR LLC, through its control of Fidelity, and the
funds each has sole power to dispose of the 4,500,000 Shares owned by the Funds.
Members of the family of Edward C. Johnson 3d, Chairman of FMR LLC, are the
predominant owners, directly or through trusts, of Series B voting common shares
of FMR LLC, representing 49% of the voting power of FMR LLC. The Johnson family
group and all other Series B shareholders have entered into a shareholders’
voting agreement under which all Series B voting common shares will be voted in
accordance with the majority vote of Series B voting common shares. Accordingly,
through their ownership of voting common shares and the execution of the
shareholders’ voting agreement, members of the Johnson family may be deemed,
under the Investment Company Act of 1940, to form a controlling group with
respect to FMR LLC. Neither FMR LLC nor Edward C. Johnson 3d, Chairman of FMR
LLC, has the sole power to vote or direct the voting of the shares owned
directly by the Fidelity funds, which power resides with the Funds’ Boards of
Trustees. Fidelity carries out the voting of the shares under written guidelines
established by the Funds’ Boards of Trustees. Fidelity has indicated that it may
be deemed to be an affiliate of a registered broker-dealer. Fidelity has
represented that it acquired the shares in the ordinary course of business and,
at the time of the acquisition of the shares, had no agreements or
understandings, directly or indirectly, with any person to distribute the
shares.

(7)

Joseph Edelman makes investment and voting decisions with respect to shares
held by Perceptive Life Sciences Master Fund Ltd.

(8)

James J. Tiampo, President of Verbier Management Corp., which is the general
partner of Burguete Investment Partnership, LP, makes investment and voting
decisions with respect to shares held by Burguete Investment Partnership, LP.

(9)

Andrew Yoichi Kurita, Portfolio Manager, makes investment and voting
decisions with respect to shares held by Kettle Hill Master Fund, Ltd., Kettle
Hill Partners, L.P. and Kettle Hill Partners II, L.P.

(10)

Heights Capital Management, Inc., the authorized agent of Capital Ventures
International (“CVI”), has discretionary authority to vote and dispose of the
shares held by CVI and may be deemed to be the beneficial owner of these shares.
Martin Kobinger, in his capacity as Investment Manager of Heights Capital
Management, Inc., may also be deemed to have investment discretion and voting
power over the shares held by CVI. Mr. Kobinger disclaims any such beneficial
ownership of the shares. CVI is affiliated with one or more FINRA members, none
of whom are currently expected to participate in the sale pursuant to the
prospectus contained in this Registration Statement of shares held by CVI. CVI
has represented that it acquired the shares in the ordinary course of business
and, at the time of the acquisition of the shares, had no agreements or
understandings, directly or indirectly, with any person to distribute the
shares.

(11)

Fariba Ghodsian, Managing Member, makes investment and voting decisions with
respect to shares held by DAFNA Lifescience LTD, DAFNA Lifescience Market
Neutral LTD and DAFNA Lifescience Select LTD.

(12)

Christopher M. Brown, Managing Member of the general partner of Aristides
Fund LP, makes investment and voting decisions with respect to shares held by
Aristides Fund LP.

(13)

Robert J. Evans, Managing Partner, makes investment and voting decisions with
respect to shares held by Pennington Capital LLC.

(14)

Michael S. Wallace, Managing Member, makes investment and voting decisions
with respect to shares held by Itasca Capital Partners, LLC.

(15)

Russ Silvestri, Managing Director, makes investment and voting decisions with
respect to shares held by L2 Opportunity Fund.

(16)

Zachary Quinn Piper, Partner, makes investment and voting decisions with
respect to shares held by FT Options, LLC.

(17)

Iroquois Capital Management L.L.C. (Iroquois Capital) is the investment
manager of Iroquois Master Fund, Ltd (IMF). Consequently, Iroquois Capital has
voting control and investment discretion over securities held by IMF. As
managing members of Iroquois Capital, Joshua Silverman and Richard Abbe make
voting and investment decisions on behalf of Iroquois Capital in its capacity as
investment manager to IMF. As a result of the foregoing, Mr. Silverman and Mr.
Abbe may be deemed to have beneficial ownership (as determined under Section
13(d) of the Securities Exchange Act of 1934, as amended) of the securities held
by IMF. Notwithstanding the foregoing, Mr. Silverman and Mr. Abbe disclaim such
beneficial ownership.

(18)

Kingsbrook Partners LP (“Kingsbrook Partners”) is the investment manager of
Kingsbrook Opportunities Master Fund LP (“Kingsbrook Opportunities”) and
consequently has voting control and investment discretion over securities held
by Kingsbrook Opportunities. Kingsbrook Opportunities GP LLC (“Opportunities
GP”) is the general partner of Kingsbrook Opportunities and may be considered
the beneficial owner of any securities deemed

14


to be beneficially owned by Kingsbrook Opportunities. KB GP LLC (“GP LLC”) is
the general partner of Kingsbrook Partners and may be considered the beneficial
owner of any securities deemed to be beneficially owned by Kingsbrook Partners.
Ari J. Storch, Adam J. Chill and Scott M. Wallace are the sole managing members
of Opportunities GP and GP LLC and as a result, may be considered beneficial
owners of any securities deemed beneficially owned by Opportunities GP and GP
LLC. Each of Kingsbrook Partners, Opportunities GP, GP LLC and Messrs. Storch,
Chill and Wallace disclaim beneficial ownership of these securities.

(19)

Cranshire Capital Advisors, LLC (“CCA”) is the investment manager of
Cranshire Capital Master Fund, Ltd. (“Cranshire Master Fund”) and has voting
control and investment discretion over securities held by Cranshire Master Fund.
Mitchell P. Kopin, the president, the sole member and the sole member of the
Board of Managers of CCA, has voting control over CCA. As a result, each of Mr.
Kopin and CCA may be deemed to have beneficial ownership (as determined under
Section 13(d) of the Exchange Act of the securities held by Cranshire Master
Fund. CCA is also the investment manager for a managed account for Freestone
Advantage Partners, II LP (“Freestone II”), and CCA has voting control and
investment discretion over securities held by Freestone II. As a result, Mr.
Kopin may be deemed to be the beneficial owner of the 15,000 shares of Common
Stock held by Freestone II consisting of (i) 10,000 shares of Common Stock held
by Freestone II, and (ii) 5,000 shares of Common Stock issuable upon exercise of
Warrants held by Freestone II.

(20)

Cranshire Capital Advisors, LLC (“CCA”) is the investment manager of a
managed account for Freestone Advantage Partners II, LP (“Freestone II”) and has
voting control and investment discretion over securities held by Freestone II in
such managed account. Mitchell P. Kopin, the president, the sole member and the
sole member of the Board of Managers of CCA, has voting control over CCA. As a
result, Mr. Kopin and CCA may be deemed to be the beneficial owner (as
determined under Section 13(d) of the Securities Exchange Act, as amended) of
the securities held by Freestone II in such managed account. CCA is also the
investment manager of Cranshire Capital Master Fund, Ltd (“Cranshire Master
Fund”) and CCA has voting control and investment discretion over securities held
by Cranshire Master Fund. Mr. Kopin, the sole member and the sole member of the
Board of Managers of CCA, has voting control over CCA. As a result, each of Mr.
Kopin and CCA may be deemed to have beneficial ownership (as determined under
Section 13(d) of the Securities Exchange Act, as amended) of the securities held
by Cranshire Master Fund that are described in footnote 19 above.

(21)

Joshua Thomas or Michel Amsalem make investment and voting decisions with
respect to shares held by Midsummer Small Cap Master, Ltd.

(22)

Richard O’Leary, Partner, makes investment and voting decisions with respect
to shares held by Lacuna Hedge Fund, LLLP.

(23)

Mr. Koppler is a member of our Board of Directors and was appointed by the
Third Security Entities, as holders of Series A Preferred.

(24)

Mr. Patzig serves on our Board of Directors and was appointed by the Third
Security Entities, as holders of Series A Preferred.

(25)

Mr. Fisher serves as assistant general counsel to the Third Security
Entities, which are also Selling Stockholders hereunder and holders of Series A
Preferred.

(26)

Mr. Qualen has indicated that he may be deemed to be an affiliate of a
registered broker-dealer. Mr. Qualen has represented that he acquired his shares
in the ordinary course of business and, at the time of the acquisition of the
shares, had no agreements or understandings, directly or indirectly, with any
person to distribute the shares.

(27)

Mr. Baker makes investment and voting decisions with respect to shares held
in the Craig-Halum Capital Group 401(k) Bradley W. Baker Roth 410(k) Account.
Mr. Baker has indicated that he may be deemed to be an affiliate of a registered
broker-dealer. Mr. Baker has represented that he acquired his shares in the
ordinary course of business and, at the time of the acquisition of the shares,
had no agreements or understandings, directly or indirectly, with any person to
distribute the shares.

(28)

Mr. Sutton has indicated that he may be deemed to be an affiliate of a
registered broker-dealer. Mr. Sutton has represented that he acquired his shares
in the ordinary course of business and, at the time of the acquisition of the
shares, had no agreements or understandings, directly or indirectly, with any
person to distribute the shares.

(29)

Mr. and Mrs. Zavoral have indicated that they may be deemed to be an
affiliate of a registered broker-dealer. Mr. and Mrs. Zavoral have represented
that they acquired their shares in the ordinary course of business and, at the
time of the acquisition of the shares, had no agreements or understandings,
directly or indirectly, with any person to distribute the shares.

(30)

Mr. Hartfield has indicated that he may be deemed to be an affiliate of a
registered broker-dealer. Mr. Hartfield

15


has represented that he acquired his shares in the ordinary course of
business and, at the time of the acquisition of the shares, had no agreements or
understandings, directly or indirectly, with any person to distribute the
shares.

(31)

Mr. Flood has indicated that he may be deemed to be an affiliate of a
registered broker-dealer. Mr. Flood has represented that he acquired his shares
in the ordinary course of business and, at the time of the acquisition of the
shares, had no agreements or understandings, directly or indirectly, with any
person to distribute the shares.

(32)

Mr. Harris has indicated that he may be deemed to be an affiliate of a
registered broker-dealer. Mr. Harris has represented that he acquired his shares
in the ordinary course of business and, at the time of the acquisition of the
shares, had no agreements or understandings, directly or indirectly, with any
person to distribute the shares.

(33)

Mr. Haslinger has indicated that he may be deemed to be an affiliate of a
registered broker-dealer. Mr. Haslinger has represented that he acquired his
shares in the ordinary course of business and, at the time of the acquisition of
the shares, had no agreements or understandings, directly or indirectly, with
any person to distribute the shares.

DESCRIPTION OF COMMON STOCK

General Matters

The Company’s Board of Directors is authorized to issue up to 100,000,000
shares of Common Stock, from time to time, as provided in a resolution or
resolutions adopted by the Board of Directors.

Common Stock

As of March 13, 2012, 71,625,725 shares of our Common Stock were issued and
outstanding, held by approximately 2,800 stockholders of record, not including
beneficial holders whose shares are held in names other than their own.

Dividends, Voting Rights and Liquidation

Holders of Common Stock are entitled to one vote for each share held of
record on all matters submitted to a vote of the shareholders and do not have
cumulative voting rights. Holders of Common Stock are entitled to receive
ratably such dividends, if any, as may be declared from time to time by our
Board of Directors out of funds legally available for dividend payments. All
outstanding shares of Common Stock are fully paid and non-assessable. The
holders of Common Stock have no preferences or rights of conversion, exchange,
pre-emption or other subscription rights. There are no redemption or sinking
fund provisions applicable to the Common Stock. In the event of any liquidation,
dissolution or winding-up of our affairs, holders of Common Stock will be
entitled to share ratably in our assets that are remaining after payment or
provision for payment of all of our debts and obligations. The rights,
preferences and privileges of Common Stock are subject to, and may be adversely
affected by, the rights of the holders of shares of any series of preferred
stock currently outstanding or which may designate and issue in the future.

Preferred Stock

General Matters

Under our Third Amended and Restated Certificate of Incorporation (the
“Certificate of Incorporation”), we have the authority to issue up to 15,000,000
shares of preferred stock, $0.01 par value per share (“Preferred Stock”),
issuable in specified series and having specified voting, dividend, conversion,
liquidation, and other rights and preferences as our Board of Directors may
determine, subject to limitations set forth in our Certificate of Incorporation.
The Preferred Stock may be issued for any lawful corporate purpose without
further action by our stockholders. The issuance of any Preferred Stock having
conversion rights might have the effect of diluting the interests of our other
stockholders. In addition, shares of Preferred Stock could be issued with
rights, privileges and preferences which would deter a tender or exchange offer
or discourage the acquisition of control of the Company.

Series A Convertible Preferred Stock

Of the number of shares of Preferred Stock authorized by or Certificate of
Incorporation, as of March 13, 2012, 3,879,307 shares had been designated Series
A Convertible Preferred Stock with such rights, privileges and preferences as
set forth in the Certificate of Designation of Series A Convertible Preferred
Stock and filed with the Secretary of State of the State of Delaware on December
28, 2011 (the “Certificate of Designation”). As of March 13, 2012, 2,586,205
shares of the Series A Convertible

16


Preferred Stock (the “Series A Preferred”) were issued and outstanding.

Certain rights of the holders of the Series A Preferred are senior to the
rights of the holders of our Common Stock. The Series A Preferred has a
liquidation preference equal to its original price per share, plus any accrued
and unpaid dividends thereon. The Series A Preferred accrues cumulative
dividends at the rate of 10.0% of the original price per share per annum.

All outstanding shares of Series A Preferred will be automatically converted
into Common Stock, at an initial conversion rate of 4:1, at the election of the
holders of a majority of the then-outstanding shares of Series A Preferred. At
any time following the fifth anniversary of the original issue date, the holders
of a majority of the then-outstanding Series A Preferred, voting together as a
separate class, can require the Company to redeem all of the then-outstanding
Series A Preferred at a price equal to the then-current stated value of such
shares plus all accrued but unpaid dividends thereon. The initial conversion
rate for the Series A Preferred is subject to adjustment in the event of certain
stock splits, stock dividends, mergers, reorganizations, reclassifications, and
dilutive issuances.

The Certificate of Designation provides that the holders of Series A
Preferred shall be entitled, as a separate voting group, at each annual or
special election of directors, to elect two directors of the Company.

Generally, the holders of the Series A Preferred are entitled to vote
together as a single group with the holders of Common Stock on an as-converted
basis. However, the Certificate of Designation provides that we will not perform
the following activities, subject to certain exceptions, without the affirmative
vote of a majority of the holders of the outstanding shares of Series A
Preferred:

authorize, create or issue any other class or series of capital stock having
rights, preferences or privileges senior to or in parity with the Series A
Preferred;

alter or change the rights, preferences or privileges of the Series A
Preferred or increase or decrease the authorized number of shares of Series A
Preferred;

authorize or declare any dividends on the common shares or any other shares
of capital stock other than the Series A Preferred;

authorize any offering of equity securities of the Company representing (on a
pro forma basis after giving effect to the issuance of such equity securities)
the right to receive not less than 10% of any amounts or funds that would, as of
immediately following such issuance, be legally available for distribution in
connection with a liquidation event;

redeem any shares of capital stock (other than pursuant to employee
agreements or the terms of the capital stock);

increase or decrease the authorized number of members of the Board;

enter into any binding agreement with any director, employee or any affiliate
of the Company;

materially change the nature of the Company’s business, enter into new lines
of business or exit the current line of business or invest in any person or
entity engaged in a business that is not substantially similar to the Company’s
business, or change the location of any permanent location of any part of the
Company’s business, in each case except as contemplated by the Asset Purchase
Agreement dated as if November 29, 2010, by and among PGxHealth, LLC, Clinical
Data, Inc. and Transgenomic (the “Purchase Agreement”) or any of the transaction
documents included therein;

make any loans or advances, individually or in the aggregate in excess of
$1,000,000, to, or own any securities of, any subsidiary or other corporation or
other entity unless it is wholly owned by the Company;

make any loan or advance to any natural person, including, without
limitation, any employee or director of the Company, except advances and similar
expenditures in the ordinary course of business;

guarantee, directly or indirectly, any indebtedness, except for trade
accounts of the Company arising in the ordinary course of business;

sell or otherwise dispose of any assets of the Company with a value,
individually or collectively, in excess of $500,000, other than in the ordinary
course of business;

17


liquidate or wind-up the business and affairs of the Company or effect a
change in control or any other liquidation event;

incur any indebtedness in excess of $1,000,000 in the aggregate, other than
trade credit incurred in the ordinary course of business or as contemplated by
the Purchase Agreement;

expend funds in excess of $500,000 in the aggregate per year for capital
improvements, other than any such expenditure that is consistent with a budget
approved by the Board, including the directors elected by the holders of Series
A Preferred or as contemplated by the Purchase Agreement;

obligate the Company to make aggregate annual payments in excess of $500,000
or sell, transfer or license any material technology or intellectual property of
the Company, other than a non-exclusive license in the ordinary course of
business, in each case except as contemplated by the Purchase Agreement; or

increase the number of shares reserved and issuable under any of the
Company’s equity or option incentive compensation plans.

Anti-Takeover Effects Under Section 203 of the Delaware General
Corporation Law

We are subject to Section 203 of the Delaware General Corporation Law, which
prohibits a Delaware corporation from engaging in any business combination with
any interested stockholder for a period of three years after the date that such
stockholder became an interested stockholder, with the following exceptions:

before such date, the board of directors of the corporation approved either
the business combination or the transaction that resulted in the stockholder
becoming an interested stockholder;

upon completion of the transaction that resulted in the stockholder becoming
an interested stockholder, the interested stockholder owned at least 85% of the
voting stock of the corporation outstanding at the time the transaction began,
excluding for purposes of determining the voting stock outstanding (but not the
outstanding voting stock owned by the interested stockholder) those shares owned
(i) by persons who are directors and also officers and (ii) employee stock plans
in which employee participants do not have the right to determine confidentially
whether shares held subject to the plan will be tendered in a tender or an
exchange offer; or

on or after such date, the business combination is approved by our board of
directors and authorized at an annual or a special meeting of the stockholders,
and not by written consent, by the affirmative vote of at least
662/3% of the outstanding voting stock that is not owned by the
interested stockholder.

In general, Section 203 defines “business combination” to include the
following:

any merger or consolidation involving the corporation or any direct or
indirect majority owned subsidiary of the corporation and the interested
stockholder or any other corporation, partnership, unincorporated association,
or other entity if the merger or consolidation is caused by the interested
stockholder and as a result of such merger or consolidation the transaction is
not excepted as described above;

any sale, transfer, pledge, or other disposition (in one transaction or a
series) of 10% or more of the assets of the corporation involving the interested
stockholder;

subject to certain exceptions, any transaction that results in the issuance
or transfer by the corporation of any stock of the corporation to the interested
stockholder;

any transaction involving the corporation that has the effect of increasing
the proportionate share of the stock or any class or series of the corporation
beneficially owned by the interested stockholder; or

the receipt by the interested stockholder of the benefit of any loss,
advances, guarantees, pledges, or other financial benefits by or through the
corporation.

In general, Section 203 defines an “interested stockholder” as an entity or a
person who, together with the person’s affiliates and associates, beneficially
owns, or within three years prior to the time of determination of interested
stockholder status did own, 15% or more of the outstanding voting stock of the
corporation.

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A Delaware corporation may “opt out” of these provisions with an express
provision in its original certificate of incorporation or an express provision
in its certificate of incorporation or bylaws resulting from a stockholders’
amendment approved by at least a majority of the outstanding voting shares. We
have not opted out of these provisions. As a result, mergers or other takeover
or change in control attempts of us may be discouraged or prevented.

Anti-Takeover Effects Under Certain Provisions of our Certificate of
Incorporation and Bylaws

Our Certificate of Incorporation and our Amended and Restated Bylaws
(“Bylaws”) include a number of provisions that may have the effect of deterring
hostile takeovers or delaying or preventing changes in control or management of
the Company.

First, our Certificate of Incorporation provides that all stockholder actions
must be effected at a duly called meeting of holders and not by a consent in
writing.

Second, our Bylaws provide that special meetings of the holders may be called
only by the chairman of the Board of Directors, the Chief Executive Officer or
our Board of Directors pursuant to a resolution adopted by a majority of the
total number of authorized directors.

Third, our Certificate of Incorporation provides that our Board of Directors
can issue up to 15,000,000 shares of Preferred stock, as described under
“Preferred Stock” above.

Fourth, our Certificate of Incorporation and the Bylaws provide for a
classified Board of Directors in which approximately one-third of the directors
would be elected each year. Consequently, any potential acquirer would need to
successfully complete two proxy contests in order to take control of the Board
of Directors. As a result of the provisions of the Certificate of Incorporation
and Delaware law, stockholders will not be able to cumulate votes for directors.

Fifth, our Certificate of Incorporation prohibits a business combination with
an interested stockholder without the approval of the holders of 75% of all
voting shares and the vote of a majority of the voting shares held by
disinterested stockholders, unless it has been approved by a majority of the
disinterested directors.

Finally, our Bylaws establish procedures, including advance notice
procedures, with regard to the nomination of candidates for election as
directors and stockholder proposals. These provisions of our Third Amended and
Restated Certificate of Incorporation and our Amended and Restated Bylaws could
discourage potential acquisition proposals and could delay or prevent a change
in control or management of our company.

Warrants

In addition to the Warrants to purchase 11,000,000 of the shares of Common
Stock we are registering hereunder, as of March 13, 2012, warrants to purchase
380,000 shares of Common Stock with an exercise price of $1.25 per share were
outstanding, and warrants to purchase 1,293102 shares of Series A Preferred with
an exercise price of $2.32 per share were outstanding. All outstanding warrants
contain provisions for the adjustment of the exercise price in the event of
stock dividends, stock splits, reorganizations, reclassifications or mergers. In
addition, certain of the warrants contain a “cashless exercise” feature that
allows the holders thereof to exercise the warrants without a cash payment to us
under certain circumstances.

Listing

Our Common Stock is traded on the OTC Bulletin Board under the symbol “TBIO”.

Transfer Agent and Registrar

Wells Fargo Bank Minnesota, N.A., is the transfer agent and registrar for our
Common Stock. Their address is Shareowner Services, P.O. Box 64854, St. Paul, MN
55164-0854, and their telephone number is (800) 478-9715.

UNITED STATES FEDERAL INCOME TAX
CONSIDERATIONS

The following is a summary of the material U.S. federal income tax
considerations relating to the purchase, ownership and disposition of the shares
of the Common Stock purchased by the investor pursuant to this offering and
ownership of the Warrants and exercise, lapse or disposition of the Warrants. We
have based this summary upon the Internal Revenue Code of

19


1986, as amended (the “Code”), Treasury regulations promulgated under the
Code, as amended (the “Treasury Regulations”), administrative rulings and
pronouncements and judicial decisions, in each case as of the date hereof. These
authorities are subject to differing interpretations and are subject to change,
perhaps retroactively, resulting in U.S. federal income tax consequences
different from those discussed below. We have not sought any ruling from the
Internal Revenue Service (the “IRS”) with respect to the statements made and the
conclusions reached in the following summary, and there can be no assurance that
the IRS will agree with such statements and conclusions or that a court will not
sustain any challenge by the IRS in the event of litigation.

This summary assumes that a beneficial owner will hold the Warrants or shares
of the Common Stock, as the case may be, as capital assets within the meaning of
section 1221 of the Code. This summary does not address the tax consequences
arising under the laws of any state or local jurisdiction or non-U.S.
jurisdiction or any other U.S. federal tax consequences, such as estate and gift
tax consequences. In addition, this summary does not address all tax
considerations that might be applicable to your particular circumstances (such
as the alternative minimum tax provisions of the Code), or to certain types of
holders subject to special tax rules, including, without limitation,
partnerships, banks, financial institutions or other “financial services”
entities, broker-dealers, insurance companies, tax-exempt organizations,
regulated investment companies, real estate investment trusts, retirement plans,
individual retirement accounts or other tax-deferred accounts, persons who use
or are required to use mark-to-market accounting for federal income tax
purposes, persons that hold the Warrants or shares of the Common Stock as part
of a “straddle”, a “hedge”, a “conversion transaction” or other arrangement
involving more than one position, U.S. holders (as defined below) that have a
functional currency other than the U.S. dollar and certain former citizens or
permanent residents of the United States.

If a partnership holds the Warrants or shares of the Common Stock, the tax
treatment of a partner in the partnership will generally depend upon the status
of the partner and the activities of the partnership. If you are a partner of a
partnership holding the Warrants or shares of the Common Stock, you should
consult your tax advisor.

If you are considering the purchase of the shares of the Common Stock or an
investment in or the exercise or disposition of the Warrants, or permitting the
Warrants to lapse unexercised, you should consult your own tax advisors
concerning the U.S. federal income tax consequences to you in light of your
particular facts and circumstances and any consequences arising under the laws
of any state, local, foreign or other taxing jurisdiction.

As used in this discussion, a “U.S. Holder” is a beneficial owner of the
Warrants or shares of the Common Stock, as applicable, that is not a partnership
or entity treated as a partnership for U.S. federal income tax purposes and is:

an individual who is a citizen or resident of the United States;

a corporation (or other entity treated as a corporation for U.S. federal
income tax purposes) created or organized in or under the laws of the United
States, any state thereof or the District of Columbia;

an estate, the income of which is subject to U.S. federal income taxation
regardless of its source; or

a trust (i) if a court within the United States is able to exercise primary
supervision over its administration and one or more U.S. persons have authority
to control all substantial decisions of the trust or (ii) that has a valid
election in effect under applicable Treasury Regulations to be treated as a U.S.
person.

As used in this discussion, a “Non-U.S. Holder” is a beneficial owner of the
Warrants or shares of the Common Stock, as applicable, that is neither a U.S.
Holder nor a partnership or other entity treated as a partnership for U.S.
federal income tax purposes. Special rules may apply to Non-U.S. Holders that
are subject to special treatment under the Code, including controlled foreign
corporations, passive foreign investment companies, U.S. expatriates, and
foreign persons eligible for benefits under an applicable income tax treaty with
the United States. Such Non-U.S. Holders should consult their tax advisors to
determine U.S. federal, state, local and other tax consequences that may be
relevant to them.

THIS DISCUSSION IS ONLY A SUMMARY OF CERTAIN MATERIAL U.S. FEDERAL INCOME TAX
OF THE ACQUISITION, OWNERSHIP AND DISPOSITION OF THE COMMON STOCK AND OWNERSHIP
AND EXERCISE, DISPOSITION OR LAPSE OF THE WARRANTS. IT IS NOT TAX ADVICE. EACH
PROSPECTIVE INVESTOR IS URGED TO CONSULT ITS TAX ADVISOR WITH RESPECT TO THE
PARTICULAR TAX CONSEQUENCES TO SUCH INVESTOR, INCLUDING THE APPLICABILITY AND
EFFECT OF ANY LOCAL, AND NON-U.S. TAX LAWS, AS WELL AS U.S. FEDERAL TAX LAWS,
AND ANY APPLICABLE TAX TREATIES.

Consequences to U.S. Holders

Distributions on Common Stock. Distributions made
to U.S. Holders out of our current or accumulated earnings and profits, as
determined for U.S. federal income tax purposes, will be included in the income
of a U.S. Holder as dividend income and will be subject to tax as ordinary
income. Dividends received by an individual U.S. Holder in taxable years
beginning before January 1, 2013 that constitute “qualified dividend income” are
generally subject to tax at a maximum rate of 15%, provided that

20


certain holding period and other requirements are met. After December 31,
2012, higher income tax rates will apply unless further legislative action is
taken. Dividends received by a corporate U.S. Holder, except as described in the
next subsection, generally will be eligible for the 70% dividends-received
deduction.

Distributions in excess of our current and accumulated earnings and profits
will not be taxable to a U.S. Holder to the extent that the distributions do not
exceed the U.S. Holder’s adjusted tax basis in the stock to which such
distribution relates, but rather will reduce the adjusted tax basis of such
shares. To the extent that distributions in excess of our current and
accumulated earnings and profits exceed the U.S. Holder’s adjusted tax basis in
the shares of stock to which the distribution relates, such distributions will
generally be treated as the sale or exchange of such stock, resulting in capital
gain. See “-Sale, Exchange or other Taxable Disposition” below. In addition, a
corporate U.S. Holder will not be entitled to the dividends-received deduction
on this portion of a distribution.

We will notify holders of our shares after the close of our taxable year as
to the portions of the distributions attributable to that year that constitute
ordinary income, qualified dividend income and non-dividend distributions, if
any.

Limitations on Dividends-Received Deduction. A
corporate U.S. Holder may not be entitled to take the 70% dividends-received
deduction in all circumstances. Prospective corporate investors in our Common
Stock should consider the effect of:

Section 246A of the Code, which reduces the dividends-received deduction
allowed to a corporate U.S. Holder that has incurred indebtedness that is
“directly attributable” to an investment in portfolio stock;

Section 246(c) of the Code, which, among other things, disallows the
dividends-received deduction in respect of any dividend on a share of stock that
is held for less than the minimum holding period (generally, for Common Stock,
at least 46 days during the 90 day period beginning on the date which is 45 days
before the date on which such share becomes ex-dividend with respect to such
dividend); and

Section 1059 of the Code, which, under certain circumstances, reduces the
basis of stock for purposes of calculating gain or loss in a subsequent
disposition by the portion of any “extraordinary dividend” (as defined below)
that is eligible for the dividends-received deduction.

Extraordinary Dividends. A corporate U.S. Holder
will be required to reduce its tax basis (but not below zero) in our Common
Stock by the non-taxed portion of any “extraordinary dividend” if the stock was
not held for more than two years before the earliest of the date such dividend
is declared, announced, or agreed. Generally, the non-taxed portion of an
extraordinary dividend is the amount excluded from income by operation of the
dividends-received deduction. An extraordinary dividend generally would be a
dividend that:

equals or exceeds 5% of the corporate U.S. Holder’s adjusted tax basis in the
stock to which the dividend relates, treating all dividends having ex-dividend
dates within an 85 day period as one dividend; or

exceeds 20% of the corporate U.S. Holder’s adjusted tax basis in the stock,
treating all dividends having ex-dividend dates within a 365 day period as one
dividend.

In determining whether a dividend paid on stock is an extraordinary dividend,
a corporate U.S. Holder may elect to substitute the fair market value of the
stock for its tax basis for purposes of applying these tests if the fair market
value as of the day before the ex-dividend date is established to the
satisfaction of the Secretary of the Treasury. An extraordinary dividend also
includes any amount treated as a dividend in the case of a redemption that is
either non-pro rata as to all stockholders or in partial liquidation of the
corporation, regardless of the stockholder’s holding period and regardless of
the size of the dividend. Any part of the non-taxed portion of an extraordinary
dividend that is not applied to reduce the corporate U.S. Holder’s tax basis as
a result of the limitation on reducing its basis below zero would be treated as
capital gain and would be recognized in the taxable year in which the
extraordinary dividend is received.

Corporate U.S. Holders should consult with their own tax advisors with
respect to the possible application of the extraordinary dividend provisions of
the Code to the ownership or disposition of the Warrants or the Common Stock in
their particular circumstances.

Sale, Exchange, or other Taxable Disposition of Common
Stock.
Upon the sale, exchange, or other taxable disposition of
Common Stock, a U.S. Holder generally will recognize gain or loss equal to the
difference between the amount realized upon the sale, exchange, or other taxable
disposition and the U.S. Holder’s adjusted tax basis in such shares. The amount
realized by the U.S. Holder will include the amount of any cash and the fair
market value of any other property received upon the sale, exchange, or other
taxable disposition of such shares. A U.S. Holder’s tax basis in a share
generally will be equal to the cost of the share to such U.S. Holder, which may
be adjusted for certain subsequent events (for example, if the U.S. Holder
receives a

21


non-dividend distribution, as described above). Gain or loss realized on the
sale, exchange, or other taxable disposition of Common Stock generally will be
capital gain or loss and will be long-term capital gain or loss if the shares
have been held for more than one year. Net long-term capital gain recognized by
an individual U.S. Holder before January 1, 2013 generally is subject to tax at
a maximum rate of 15%, which such maximum rate is scheduled to increase to 20%
after December 31, 2012. For corporate U.S. Holders, capital gain is generally
subject to the same tax rate as ordinary income, that is, currently at a maximum
rate of 35%. The ability of U.S. Holders to deduct capital losses is subject to
limitations under the Code.

Taxation of the Warrants. A warrant is an option
granted by an issuer of stock to acquire stock at a set price within a specified
period. Warrants are generally taxed in the same manner as options. If you
exercise a warrant, you will not recognize any gain or loss for U.S. federal
income tax purposes (except that gain or loss will be recognized to the extent
you receive cash in lieu of a fractional common share as if you had actually
received the fractional share and the fractional share was immediately redeemed
for cash). Your initial tax basis in the security received upon exercise will be
the sum of the exercise price paid and your adjusted tax basis in the warrant
(excluding any portion of such sum allocable to a fractional share), and your
holding period for the security received will begin on the day you exercise the
warrant. If you sell or exchange a warrant, you will generally recognize gain or
loss equal to the difference between the amount realized in the sale or exchange
and your adjusted tax basis in the warrant sold or exchanged. If the warrant
expires unexercised, you will recognize a loss in an amount equal to your
adjusted tax basis in the warrant. Any such gain or loss from the sale, exchange
or expiration of the Warrants will be capital gain or loss and will be long-term
capital gain or loss if your holding period for the Warrants exceeds one year at
the time of the sale, exchange or expiration.

U.S. Holders should consult with their own tax advisors regarding the U.S.
federal income tax consequences and the tax consequences of any other taxing
jurisdiction relating to the ownership and exercise, disposition or lapsing of
the Warrants in light of their investment or tax circumstances.

Information Reporting and Backup Withholding. In
general, information reporting will apply to distributions in respect of stock
and the proceeds from the sale, exchange or other disposition of stock that are
paid to a U.S. holder within the United States (and in certain cases, outside
the United States), unless the holder is an exempt recipient.

In general, backup withholding (currently at the rate of 28%, but scheduled
to increase to 31% for payments made after December 31, 2012) will apply to
payments received by a U.S. Holder with respect to shares of our Common Stock
unless the U.S. Holder is (i) a corporation or other exempt recipient and, when
required, establishes this exemption or (ii) provides its correct taxpayer
identification number, certifies that it is not currently subject to backup
withholding tax and otherwise complies with applicable requirements of the
backup withholding tax rules. A U.S. Holder that does not provide us with its
correct taxpayer identification number might be subject to penalties imposed by
the IRS.

Backup withholding is not an additional tax. Any amounts withheld under the
backup withholding rules from a payment to a U.S. Holder may be refunded or
credited against the U.S. Holder’s U.S. federal income tax liability, if any,
provided that the required information is furnished to the IRS in a timely
manner.

Medicare Tax on Investment Income. On March 30,
2010, President Obama signed into law the Health Care and Education
Reconciliation Act of 2010. This legislation requires certain individuals,
estates and trusts to pay a 3.8% Medicare surtax on “net investment income”
including, among other things, dividends and gain on sale in respect of
securities like the Warrants or shares of our Common Stock, subject to certain
exceptions, for taxable years beginning after December 31, 2012. Prospective
purchasers of the Warrants or shares of our Common Stock should consult their
own tax advisors regarding the effect, if any, of the legislation on their
ownership and disposition of the Warrants or shares of our Common Stock.

Consequences to Non-U.S. Holders

Distributions on Common Stock. Any distribution we
make to a Non-U.S. Holder of shares of our Common Stock, other than certain pro
rata distributions of Common Stock, to the extent paid out of our current or
accumulated earnings and profits (as determined under U.S. federal income tax
principles), will constitute a dividend for U.S. federal income tax purposes.
Any distribution not constituting a dividend will be treated for U.S. federal
income tax purposes as a tax-free return of capital to the extent of the
Non-U.S. Holder’s adjusted tax basis in its shares of our Common Stock (with a
corresponding reduction to such basis), and, to the extent such distribution
exceeds the Non-U.S. Holder’s adjusted tax basis, as gain from the sale or other
disposition of the Common Stock, which will be treated as described under “Sale,
Exchange, or other Taxable Disposition” below.

Generally, any distribution to a Non-U.S. Holder that is a dividend for U.S.
federal income tax purposes and that is not effectively connected with the
Non-U.S. Holder’s conduct of a trade or business within the Unites States, as
described below, will be subject to U.S. federal withholding tax at a rate of
30% percent of the gross amount of the dividend, unless such Non-U.S. Holder is
eligible for a reduced rate of withholding tax under an applicable income tax
treaty and provides proper certification of its eligibility for such reduced
rate (usually on an IRS Form W-8BEN). If the Non-U.S. Holder holds the stock
through a financial

22


institution or other agent acting on the Non-U.S. Holder’s behalf, the
Non-U.S. Holder will be required to provide appropriate documentation to the
agent, who then will be required to provide certification to us or our paying
agent, either directly or through other intermediaries. If U.S. federal income
tax is withheld on the amount of a distribution in excess of the amount
constituting a dividend, the Non-U.S. Holder may obtain a refund of all or a
portion of the excess amount withheld by timely filing a claim for refund with
the IRS. If a Non-U.S. Holder holds shares of our Common Stock in connection
with a trade or business in the United States, dividends we pay to a Non-U.S.
Holder that are effectively connected with such Non-U.S. Holder’s conduct of a
trade or business within the United States (or, if certain income tax treaties
apply, are attributable to a U.S. permanent establishment or fixed base
maintained by the Non-U.S. Holder) generally will not be subject to U.S.
withholding tax, provided such Non-U.S. Holder complies with certain
certification and disclosure requirements (usually by providing an IRS Form
W-8ECI). Instead, such dividends generally will be subject to U.S. federal
income tax, net of certain deductions, at the same graduated individual or
corporate tax rates applicable to U.S. persons. If the Non-U.S. Holder is a
foreign corporation, dividends that are effectively connected income may also be
subject to a “branch profits tax” at a rate of 30% (or such lower rate as may be
specified by an applicable income tax treaty) of its effectively connected
earnings and profits for the taxable year, as adjusted for certain items.
Non-U.S. Holders should consult any applicable income tax treaties that may
provide for different rules.

A Non-U.S. Holder who claims the benefit of an applicable income tax treaty
generally will be required to satisfy applicable certification and other
requirements prior to the distribution date. Non-U.S. Holders should consult
their tax advisors regarding their entitlement to benefits under a relevant
income tax treaty.

Sale, Exchange, or other Taxable Disposition of Common
Stock.
A Non-U.S. Holder generally will not be subject to U.S.
federal income or withholding tax on any capital gain realized on the sale,
exchange, or other taxable disposition of the Warrants or our Common Stock
provided that:

(a) the gain is not effectively connected with the conduct of a trade or
business within the United States, or a permanent establishment maintained in
the United States if certain tax treaties apply,

(b) in the case of a Non-U.S. Holder that is an individual, the Non-U.S.
Holder is not present in the United States for 183 days or more in the taxable
year of the sale, exchange, or other disposition of the shares,

(c) the Non-U.S. Holder is not subject to tax pursuant to certain provisions
of U.S. federal income tax law applicable to certain expatriates, and

(d) we are not nor have we been a “United States real property holding
corporation” (“USRPHC”) for U.S. federal income tax purposes.

Unless an applicable tax treaty provides otherwise, gain described in the (a)
or (d) above generally will be subject to U.S. federal income tax, net of
certain deductions, at the same tax rates applicable to U.S. persons. Any gains
described in (a) above of a Non-U.S. Holder that is a foreign corporation may
also be subject to an additional “branch profits tax” at a rate of 30% (or such
lower rate as may be specified by an applicable income tax treaty) of its
effectively connected earnings and profits for the taxable year, as adjusted for
certain items. Any U.S. source capital gain of a Non-U.S. Holder described in
(b) above (which may be offset by U.S. source capital losses during the taxable
year of the disposition provided that the Non-U.S. Holder has timely filed U.S.
federal income tax returns with respect to such losses) generally will be
subject to a flat 30% U.S. federal income tax (or such lower rate as may be
specified by an applicable income tax treaty).

With respect to (d) above, we would not be treated as a USRPHC if less than
50% of our assets throughout a prescribed testing period consist of interests in
real property located within the United States, excluding, for this purpose,
interests in real property solely in a capacity as a creditor. We believe that
we are not currently, and do not anticipate becoming, a “United States real
property holding corporation” for U.S. federal income tax purposes
.
However, even if we are or have been a USRPHC, so long as our Common
Stock is regularly traded on an established securities market, a Non-U.S. Holder
will not recognize taxable gain, if any, on a sale, exchange, redemption,
conversion or other taxable disposition of the Common Stock or Warrants under
(d) above unless:

the Non-U.S. Holder recognizes gain on the sale, exchange, redemption,
conversion or other taxable disposition of our Common Stock which is regularly
traded, and actually or constructively owns more than 5% of our Common Stock at
any time during the five-year period ending on the date of disposition or, if
shorter, the Non-U.S. Holder’s holding period for the Common Stock;

the Non-U.S. Holder recognizes gain on the sale, exchange, redemption,
conversion or other taxable disposition of the Warrants, the Warrants are
considered to be regularly traded on an established securities market, and the
Non-U.S. Holder actually or constructively owns more than 5% of such Warrants at
any time during the five-year period ending on the date of disposition or, if
shorter, the Non-U.S. Holder’s holding period for the Warrants; or

23


the Non-U.S. Holder recognizes gain on the sale, exchange, redemption,
conversion or other taxable disposition of the Warrants, the Warrants are not
considered to be regularly traded on an established securities market, and, as
of the latest date that the Non-U.S. Holder acquired any of the Warrants, the
fair market value of all Warrants held by the Non-U.S. Holder, directly or
indirectly, had a fair market value greater than 5% of the fair market value of
our Common Stock.

If any of the three bullet points immediately described above applies to a
Non-U.S. Holder of our Warrants or Common Stock, then the gain recognized by a
Non-U.S. Holder on the sale, exchange, redemption, conversion, if applicable, or
other disposition of such would be treated as effectively connected with a U.S.
trade or business if we are a USRPHC. In such situations, the Non-U.S. Holder
would be subject to U.S. federal income tax at applicable graduated U.S. federal
income tax rates in much the same manner as applicable to U.S. persons and may
be subject to withholding tax at a 10% rate with respect to the gross proceeds
realized with respect to the sale, exchange, redemption, conversion or other
disposition of the Warrants or our Common Stock. Non-U.S. Holders are urged to
consult their own tax advisors in determining the U.S. tax consequences of their
investment in the Warrants or our Common Stock.

Taxation of the Warrants. If you exercise a
Warrant, you will not recognize any gain or loss for U.S. federal income tax
purposes (except that gain or loss will be recognized to the extent you receive
cash in lieu of a fractional common share as if you had actually received the
fractional share and the fractional share was immediately redeemed for cash).
Your initial tax basis in the security received upon exercise will be the sum of
the exercise price paid and your adjusted tax basis in the warrant (excluding
any portion of such sum allocable to a fractional share), and your holding
period for the security received will begin on the day you exercise the warrant
or subscription right. If you sell or exchange a warrant, you will generally
recognize gain or loss equal to the difference between the amount realized in
the sale or exchange and your adjusted tax basis in the warrant sold or
exchanged. If the warrant expires unexercised, you will recognize a loss in an
amount equal to your adjusted tax basis in the warrant at such time. Any such
gain or loss from the sale, exchange or expiration of the Warrants will be
capital gain or loss and will be long-term capital gain or loss if your holding
period for the Warrants exceeds one year at the time of the sale, exchange or
expiration. Non-U.S. Holders of Warrants should see the discussion above under
“Distributions on Common Stock” and “Sale, Exchange, or other Taxable
Disposition of Common Stock” and should consult their own tax advisers with
respect to the United States federal income tax and withholding tax, and state,
local and foreign tax consequences of ownership and exercise, disposition or
lapsing, of the Warrants.

Information Reporting and Backup Withholding. We
generally must report annually to the IRS and to each Non-U.S. Holder the amount
of dividends and certain other distributions we pay to such holder on our Common
Stock and the amount of tax, if any, withheld with respect to those
distributions. Copies of the information returns reporting those distributions
and withholding may also be made available to the tax authorities in the country
in which the Non-U.S. Holder is a resident under the provisions of an applicable
income tax treaty or agreement. Information reporting is also generally required
with respect to proceeds from the sales and other dispositions of our Common
Stock to or through the United States office (and in certain cases, the foreign
office) of a broker.

In addition, backup withholding of U.S. federal income tax, currently at a
rate of 28%, generally will apply to distributions made on our Common Stock to,
and the proceeds from sales and other dispositions of our Common Stock by, a
non-corporate U.S. holder who:

fails to provide an accurate taxpayer identification number;

is notified by the IRS that backup withholding is required; or

in certain circumstances, fails to comply with applicable certification
requirements.

A Non-U.S. Holder generally may eliminate the requirement for information
reporting and backup withholding with respect to payments of dividends by
providing certification of its foreign status, under penalties of perjury, on a
duly executed applicable IRS Form W-8 or by otherwise establishing an exemption.
Notwithstanding the foregoing, backup withholding may apply if either we or our
paying agent has actual knowledge or reason to know that the holder is a United
States person that is not an exempt recipient.

Backup withholding is not an additional tax. Rather, the amount of any backup
withholding will be allowed as a credit against a U.S. holder’s or a Non-U.S.
Holder’s U.S. federal income tax liability and may entitle such holder to a
refund, provided that certain required information is timely furnished to the
IRS. Holders are urged to consult their own tax advisors regarding the
application of backup withholding and the availability of and procedure for
obtaining an exemption from backup withholding in their particular
circumstances.

24


Foreign Financial Institutions. On March 18, 2010,
President Obama signed into law the Hiring Incentives to Restore Employment Act
(the “Act”). The Act imposes withholding taxes on certain types of payments made
to “foreign financial institutions” (as specifically defined in the Act) and
certain other non-United States entities (including financial intermediaries)
after December 31, 2012. The Act imposes a 30% withholding tax on “withholdable
payments” to a foreign financial institution or to a foreign non-financial
entity, unless (i) the foreign financial institution undertakes certain
diligence and reporting obligations or (ii) the foreign non-financial entity
either certifies it does not have any substantial United States owners or
furnishes identifying information regarding each substantial United States
owner. For these purposes, a “withholdable payment” includes any United States
source payments of interest (including original issue discount), dividends,
rents, compensation and other fixed or determinable annual or periodical gains,
profits and income. If the payee is a foreign financial institution, it must
enter into an agreement with the United States Department of the Treasury
requiring, among other things, that it undertake to identify accounts held by
certain United States persons or United States-owned foreign entities, annually
report certain information about such accounts, and withhold 30% on payments to
account holders whose actions prevent it from complying with these reporting and
other requirements. Although this legislation currently applies to applicable
payments made after December 31, 2012, recently issued Proposed Treasury
Regulations provide that the withholding provisions described above will
generally apply to payments of dividends on our Common Stock made on or after
January 1, 2014 and to payments of gross proceeds from a sale or other
disposition of such stock on or after January 1, 2015. Prospective purchasers of
shares of the Warrants or shares of our Common Stock should consult their tax
advisors regarding this legislation and the potential implications of this
legislation on their particular circumstances.

LEGAL MATTERS

The validity of our Common Stock offering hereby will be passed upon by Husch
Blackwell LLP.

25


EXPERTS

The audited consolidated financial statements of Transgenomic, Inc. and its
subsidiaries as of December 31, 2011 and 2010, and for the three-year period
ended December 31, 2011, included in our Annual Report on Form 10-K for the year
ended December 31, 2011, and the effectiveness of our internal control over
financial reporting as of December 31, 2011, incorporated by reference in this
prospectus have been audited by McGladrey & Pullen, LLP, independent
registered public accounting firm, as stated in their report dated March 20,
2012, which is incorporated by reference herein, and has been so incorporated in
reliance upon the report of such firm given upon their authority as experts in
accounting and auditing.

WHERE YOU CAN FIND ADDITIONAL INFORMATION

We file annual, quarterly and current reports, proxy statements and other
documents with the SEC. These filings contain important information which does
not appear in this prospectus. You may read and copy, at prescribed rates, any
documents we have filed with the SEC at its Public Reference Room located at 100
F Street, N.E., Washington, DC 20549. You may obtain information on the
operation of the Public Reference Room by calling the SEC at 1-800-SEC-0330. We
also file these documents with the SEC electronically. You can access the
electronic versions of these filings on the SEC’s website found at
http://www.sec.gov .

We have filed with the SEC a registration statement on Form S-1 relating to
the securities covered by this prospectus. This prospectus is a part of the
registration statement and does not contain all the information in the
registration statement. Whenever a reference is made in this prospectus to a
contract, agreement or other document, the reference is only a summary and you
should refer to the exhibits that are filed with, or incorporated by reference
into, the registration statement for a copy of the contract, agreement or other
document. You may review a copy of the registration statement at the SEC’s
Public Reference Room in Washington, D.C., as well as on the SEC’s website.

INCORPORATION OF CERTAIN INFORMATION BY
REFERENCE

The SEC’s rules allow us to “incorporate by reference” into this prospectus
certain information that we file with the SEC. This means that we can include in
this prospectus information by referring you to another document already on file
with the SEC that contains that information. Any information incorporated by
reference into this prospectus is considered to be part of this prospectus.

We incorporate by reference the following documents filed with the SEC:

Our Annual Report on Form 10-K for the year ended December 31, 2011, as filed
by us with the SEC on March 14, 2012;

Our Current Report on Form 8-K as filed by us with the SEC on January 6,
2012;

Our Current Report on Form 8-K as filed by us with the SEC on February 3,
2012; and

Our Current Report on Form 8-K as filed by us with the SEC on February 7,
2012.

Notwithstanding the foregoing, we are not incorporating by reference any
information furnished and not filed with the SEC, unless, and to the extent,
expressly specified otherwise. Any statement contained in a document
incorporated in this prospectus shall be deemed to be modified or superseded to
the extent that a statement contained in this prospectus modifies or supersedes
such statement. Any such statement so modified or superseded shall only be
deemed to be a part of this prospectus as so modified or superseded.

26


We will provide without charge to each person, including any beneficial
owner, to whom this prospectus is delivered, upon his or her written or oral
request, a copy of any or all of the reports or documents referred to above that
have been incorporated by reference into this prospectus, excluding exhibits to
those documents unless they are specifically incorporated by reference into
those documents. You may request a copy of these filings, at no cost, by
contacting:

Transgenomic, Inc.

Attn: Investor Relations

12325 Emmet Street

Omaha, NE 68164

Phone: (402) 452-5416

Fax: (402) 452-5461

E-mail: investorrelations@transgenomic.com

You also may access these filings on our website at www.transgenomic.com
under Investor Relations Real Time Filings. We do not incorporate the
information on our website into this prospectus or any supplement to this
prospectus and you should not consider any information on, or that can be
accessed through, our website as part of this prospectus or any supplement to
this prospectus (other than those filings with the SEC that we specifically
incorporate by reference into this prospectus or any supplement to this
prospectus).

27


33,000,000 SHARES OF COMMON STOCK

TRANSGENOMIC, INC.

PROSPECTUS

__________ __, 2012

Neither we nor the selling shareholders have authorized any dealer,
salesperson or other person to give any information or to make any
representations not contained in this prospectus or any prospectus supplement.
You must not rely on any unauthorized information. This prospectus is not an
offer to sell these securities in any jurisdiction where an offer or sale is not
permitted. The information in this prospectus is current as of the date of this
prospectus. You should not assume that this prospectus is accurate as of any
other date.

28


PART II.

INFORMATION NOT REQUIRED IN PROSPECTUS

Item 13. Other Expenses of Issuance and Distribution.

The following table sets forth the expenses in connection with the issuance
and distribution of the securities being registered, other than underwriting
discounts and commissions. All of the amounts shown are estimated, except the
SEC registration fee.

SEC registration fee

$

4,916

Legal fees and expenses

25,000

Accounting fees and expenses

14,400

Miscellaneous

10,000

Total

$

54,316

The Company will bear all of the expenses shown above.

Item 14. Indemnification of Directors and Officers.

Section 145 of the Delaware General Corporation Law authorizes a court to
award, or a corporation to grant, indemnity to directors and officers in terms
sufficiently broad to permit such indemnification under certain circumstances
for liabilities (including reimbursement of expenses incurred) arising under the
Securities Act of 1933.

As permitted by the Delaware General Corporation Law, the Registrant’s Third
Restated Certificate of Incorporation eliminates the personal liability of its
directors for monetary damages for breach of fiduciary duty as a director,
except for liability (1) for any breach of the director’s duty of loyalty to the
Registrant or its stockholders, (2) for acts or omissions not in good faith or
that involve intentional misconduct or a knowing violation of law, (3) under
Section 174 of the Delaware General Corporation Law (regarding unlawful
dividends and stock purchases) or (4) for any transaction from which the
director derived an improper personal benefit. If the Delaware General
Corporation Law is amended to authorize further elimination or limiting of
directors’ personal liability, then the Third Amended and Restated Certificate
provides that the personal liability of directors will be eliminated or limited
to the fullest extent provided under the Delaware General Corporation Law.

As permitted by the Delaware General Corporation Law, the Registrant’s Third
Amended and Restated Certificate of Incorporation and its Amended and Restated
Bylaws provide that (1) the Registrant is required to indemnify its directors
and officers to the fullest extent permitted by the Delaware General Corporation
Law, subject to certain very limited exceptions, (2) the Registrant may
indemnify its other employees and agents as set forth in the Delaware General
Corporation Law, (3) the Registrant is required to advance expenses, as
incurred, to its directors and executive officers in connection with a legal
proceeding to the fullest extent permitted by the Delaware General Corporation
Law, subject to certain conditions and (4) the rights conferred by the Third
Amended and Restated Certificate of Incorporation and Amended and Restated
Bylaws are not exclusive.

The Delaware General Corporation Law authorizes a corporation to indemnify
its directors and officers provided that the corporation shall not eliminate or
limit the liability of a director as follows:

(a) for any action brought by or in the right of a corporation where the
director or officer is adjudged to be liable to the corporation, except where a
court determines the director or officer is entitled to indemnity;

(b) for acts or omissions not in good faith or which involve conduct that the
director or officer believes is not in the best interests of the corporation;

(c) for knowing violations of the law;

(d) for any transaction from which the directors derived an improper personal
benefit; and

29


(e) for payment of dividends or approval of stock repurchases or redemptions
leading to liability under Section 174 of the Delaware General Corporation Law.

The Delaware General Corporation Law requires a corporation to indemnify a
director or officer to the extent that the director or officer has been
successful, on the merits or otherwise, in defense of any action, suit or
proceeding for which indemnification is lawful.

Insofar as indemnification for liabilities arising under the Securities Act
of 1933 may be permitted to directors, officers or persons controlling the
registrant pursuant to the foregoing provisions, the registrant has been
informed that in the opinion of the Securities and Exchange Commission such
indemnification is against public policy as expressed in the Act and is
therefore unenforceable.

The Company maintains a director and officer insurance policy which insures
the directors and officers of the Company against damages, judgments,
settlements and costs incurred by reason of certain wrongful acts committed by
such persons in their capacities as directors and officers.

Item 15. Recent Sales of Unregistered Securities.

Series A Preferred Shares and Series A Preferred
Warrants

On December 29, 2010, the Company entered into a Series A Convertible
Preferred Stock Purchase Agreement (the “Series A Purchase Agreement”) with
Third Security Senior Staff 2008 LLC, Third Security Staff 2010 LLC, and Third
Security Incentive 2010 LLC (collectively, the “Third Security Entities”),
pursuant to which the Company: (i) sold to the Third Security Entities an
aggregate of 2,586,205 shares of the Company’s Series A Convertible Preferred
Stock (the “Series A Preferred”) at a price per share of $2.32 for aggregate
gross proceeds of approximately $6,000,000; and (ii) issued to the Third
Security Entities warrants (the “Series A Warrants”) to purchase up to an
aggregate of 1,293,102 shares of Series A Preferred with an exercise price of
$2.32 per share (collectively, the “Financing”). The Series A Preferred and
Series A Warrants were issued pursuant to applicable exemptions from the
registration requirements of the Securities Act. The Series A Warrants may be
exercised at any time from December 29, 2010 until December 28, 2015 and contain
a “cashless exercise” feature. The shares of Series A Preferred issuable
pursuant to the Series A Purchase Agreement and upon exercise of the Series A
Warrants are initially convertible into shares of the Company’s common stock
(“Common Stock”) at a rate of 4-for-1, which conversion rate is subject to
further adjustment as set forth in the Certificate of Designation of Series A
Convertible Preferred Stock. The Company used the net proceeds from the
Financing to acquire certain assets of Clinical Data, Inc. (“Clinical Data”) and
PGx Health, LLC, a wholly-owned subsidiary of Clinical Data (“PGx”).

In connection with the Financing, the Company also entered into a
registration rights agreement with the Investors (the “Registration Rights
Agreement”). Pursuant to the terms of the Registration Rights Agreement, the
Company has granted the Investors certain demand, “piggyback” and S-3
registration rights covering the resale of the shares of Common Stock underlying
the Series A Preferred issued pursuant to the Series A Purchase Agreement and
issuable upon exercise of the Series A Warrants and all shares of Common Stock
issuable upon any dividend or other distribution with respect thereto.

On November 8, 2011, the Company entered into an Amendment Agreement with the
Third Security Entities, which are the holders of all of the outstanding shares
of the Company’s Series A Preferred. Pursuant to the Amendment Agreement, the
Third Security Entities and the Company agreed to amend the Certificate of
Designation to eliminate certain features of the Series A Preferred relating to
(i) an anti-dilution adjustment to the conversion rate upon which the Series A
Preferred is convertible into the Company’s common stock and (ii) an optional
redemption of the Series A Preferred by the Third Security Investors (the
“Certificate Amendment”); subject to the requisite stockholder approval of the
Certificate Amendment at the Company’s next annual meeting of its stockholders.
Pursuant to the Amendment Agreement, the Third Security Investors agreed to vote
the Series A Preferred and their common stock in favor of the Certificate
Amendment and agreed to waive their rights to the features of the Series A
Preferred being eliminated by the Certificate Amendment. In exchange for the
Third Security Entities entering into the Amendment Agreement, the Company
agreed to issue to the holders an aggregate of $0.3 million market value of
common stock or 245,903 shares of Common Stock.

Convertible Promissory Notes

On December 30, 2011, the Company entered into a Convertible Promissory Note
Purchase Agreement (the “Note Purchase Agreement”) with the Third Security
Entities in the aggregate amount of $3.0 million. Affiliates of the investors
currently own all the outstanding shares of the Company’s Series A Preferred.
Under the Note Purchase Agreement, the Company sold to

30


each of the Third Security Entities a convertible note which had a March 31,
2012 maturity date. The Note Purchase Agreement and notes provided for
conversion of any amount remaining due to the Third Security Entities under the
notes into equity securities of the Company of the same class(es) or series and
at the same price as the equity securities of the Company sold in the Company’s
first sale or issuance of its equity securities after December 30, 2011, in the
aggregate amount of at least $3.0 million. The notes and the equity securities
into which the notes are convertible have not been registered under the
Securities Act and applicable state securities laws, but were offered and sold
in the United States pursuant to applicable exemptions from registration
requirements under the Securities Act and applicable state securities laws.

2012 Private Placement and Note Conversion

On February 2, 2012, the Company entered into a Securities Purchase Agreement
with certain institutional and other accredited investors pursuant to which the
Company: (i) sold to the investors an aggregate of 19,000,000 shares of the
Company’s Common Stock at a price per share of $1.00 for aggregate gross
proceeds of approximately $19.0 million; and (ii) issued to the investors
Warrants to purchase up to an aggregate of 9,500,000 shares of Common Stock with
an exercise price of $1.25 per share. The Warrants may be exercised, in whole or
in part, at any time from February 7, 2012 until February 7, 2017 and contain
both cash and “cashless exercise” features. The Warrants also impose penalties
on the Company for failure to deliver the shares of Common Stock issuable upon
exercise. The Company currently intends to use the net proceeds from the
offering for general corporate and working capital purposes, primarily to
accelerate development of several of the Company’s key initiatives. The common
stock and warrants were issued pursuant to applicable exemptions from
registration requirements under the Securities Act and applicable securities
law.

As part of the offering, in connection with the conversion of n convertible
promissory notes in the aggregate amount of $3.0 million issued by the Company
on December 30, 2011 to the Third Security Entities collectively received
3,000,000 shares of Common Stock and Warrants to purchase up to 1,500,000 shares
of Common Stock upon the same terms as the investors.

In connection with the offering, the Company also entered into a Registration
Rights Agreement with the investors and the Third Security Entities. The
Registration Rights Agreement requires that the Company file a registration
statement with the Securities and Exchange Commission within forty-five (45)
days of the closing date of the offering for the resale by the investors and the
Third Security Entities of all of the Common Shares, the shares of Common Stock
issuable upon exercise of the Warrants, the Third Security Common Shares, the
shares of Common Stock issuable upon exercise of the Third Security Warrants and
all shares of Common Stock issuable upon any stock split, dividend or other
distribution, recapitalization or similar event with respect thereto. The
initial registration statement must be declared effective by the SEC within
ninety (90) days of the closing date of the offering subject to certain
adjustments. Upon the occurrence of certain events, including, but not limited
to, that the initial Registration Statement is not filed prior to the filing
date, the Company will be required to pay liquidated damages to each of the
investors and the Third Security Entities upon the date of the event and then
monthly thereafter until the earlier of: (i) the event is cured, or (ii) the
registrable shares are eligible for resale under Rule 144 without manner of sale
or volume limitations. In no event shall the aggregate amount of liquidated
damages payable to each of the investors and Third Security Entities exceed in
the aggregate 10% of the aggregate purchase price paid by such investor or Third
Security Entity for the registrable securities. Pursuant to this Registration
Statement and as required by the Registration Rights Agreement, the Company is
registering the resale of the Common Shares, the shares of Common Stock issuable
upon exercise of the Warrants, the Third Security Common Shares, the shares of
Common Stock issuable upon exercise of the Third Security Warrants and all
shares of Common Stock issuable upon any stock split, dividend or other
distribution, recapitalization or similar event with respect thereto.

Craig-Hallum Capital Group LLC served as the sole placement agent for the
offering. In consideration for services rendered as the placement agent in the
offering, the Company agreed to (i) pay to the placement agent cash commissions
equal to $1,330,000, or 7.0% of the gross proceeds received in the offering,
(ii) issue to the placement agent a five-year warrant to purchase up to 380,000
shares of the Company’s Common Stock (representing 2% of the Common Shares sold
in the offering) with an exercise price of $1.25 per share and other terms that
are the same as the terms of the Warrants and the Third Security Warrants issued
in connection with the offering; and (iii) reimburse the placement agent for
reasonable out-of-pocket expenses, including fees paid to the placement agent’s
legal counsel, incurred in connection with the offering, which reimbursable
expenses shall not exceed $125,000. In addition, the Company will also pay the
placement agent the cash fee and Warrants, determined in accordance with the
percentages set forth above, if, during a 12-month period commencing January 2,
2012, the Company signs a definitive agreement or letter of intent or other
evidence of commitment which subsequently results in an offering of the
securities of the Company being consummated. The calculation of the placement
agent’s fees did not include the Third Security Common Shares and Third Security
Warrants issued to the Third Security Entities in connection with the conversion
of the convertible promissory notes described above.

31


Item 16. Exhibits

See the Exhibit Index attached hereto and incorporated herein by reference.

Item 17. Undertakings.

The undersigned Registrant hereby undertakes:

(1)

To file, during any period in which offers or sales are being made, a
post-effective amendment to this registration statement:

(i)

To include any prospectus required by Section 10(a)(3) of the Securities Act
of 1933, as amended (the “Act”);

(ii)

To reflect in the prospectus any facts or events arising after the effective
date of the registration statement (or the most recent post-effective amendment
thereof) which, individually or in the aggregate, represent a fundamental change
in the information set forth in the registration statement. Notwithstanding the
foregoing, any increase or decrease in volume of securities offered (if the
total dollar value of securities offered would not exceed that which was
registered) and any deviation from the low or high end of the estimated maximum
offering range may be reflected in the form of prospectus filed with the
Commission pursuant to Rule 424(b) if, in the aggregate, the changes in volume
and price represent no more than a 20 percent change in the maximum aggregate
offering price set forth in the “Calculation of Registration Fee” table in the
effective registration statement; and

(iii)

To include any material information with respect to the plan of distribution
not previously disclosed in the registration statement or any material change to
such information in the registration statement.

(2)

That, for the purpose of determining any liability under the Act, each such
post-effective amendment shall be deemed to be a new registration statement
relating to the securities offered therein, and the offering of such securities
at that time shall be deemed to be the initial bona fide offering thereof.

(3)

To remove from registration by means of a post-effective amendment any of the
securities being registered which remain unsold at the termination of the
offering.

(4)

That, for the purpose of determining liability under the Act to any
purchaser, each prospectus filed pursuant to Rule 424(b) as part of a
registration statement relating to an offering, other than registration
statements relying on Rule 430B or other than prospectuses filed in reliance on
Rule 430A, shall be deemed to be part of and included in the registration
statement as of the date it is first used after effectiveness. Provided, however
, that no statement made in a registration statement or prospectus that is part
of the registration statement or made in a document incorporated or deemed
incorporated by reference into the registration statement or prospectus that is
part of the registration statement will, as to purchaser with a time of contract
of sale prior to such first use, supersede or modify any statement that was made
in the registration statement or prospectus that was part of the registration
statement or made in any such document immediately prior to such date of first
use.

(5)

Insofar as indemnification for liabilities arising under the Act may be
permitted to directors, officers and controlling persons of the registrant
pursuant to the foregoing provisions, or otherwise, the registrant has been
advised that in the opinion of the Securities and Exchange Commission such
indemnification is against public policy as expressed in the Act, and is,
therefore, unenforceable. In the event that a claim for indemnification against
such liabilities (other than the payment by the registrant of expenses incurred
or paid by a director, officer or controlling person of the registrant in the
successful defense of any action, suit or proceeding) is asserted by such
director, officer or controlling person in connection with the securities being
registered, the registrant will, unless in the opinion of its counsel the matter
has been settled by controlling precedent, submit to a court of appropriate
jurisdiction the question whether such indemnification by it is against public
policy as expressed in the Act and will be governed by the final adjudication of
such issue.

32


SIGNATURES

Pursuant to the requirements of the Securities Act of 1933, as amended, the
registrant has duly caused this registration statement to be signed on its
behalf by the undersigned, thereunto duly authorized, in the city of Omaha.
State of Nebraska, on March 20, 2012.

Transgenomic, Inc.

By:

Craig J. Tuttle

President and Chief Executive Officer

(Principal Executive Officer)

POWER OF ATTORNEY

Each of the undersigned hereby appoints each of Craig J. Tuttle and Brett L.
Frevert as attorney-in-fact and agent for the undersigned, with full power of
substitution, for and in the name, place and stead of the undersigned, to sign
and file with the Securities and Exchange Commission under the Securities Act of
1933, as amended, any and all amendments (including post-effective amendments)
to this registration statement, any other registration statements and exhibits
thereto that is the subject of this registration statement filed pursuant to
Rule 462 under such Act, and any and all applications, instruments and other
documents to be filed with the Securities and Exchange Commission pertaining to
the registration of securities covered hereby, with full power and authority to
do and perform any and all acts and things as may be necessary or desirable in
furtherance of such registration.

Pursuant to the requirements of the Securities Act of 1933, as amended, this
registration statement has been signed by the following persons in the
capacities indicated on March 20, 2012.

Signature

Title

/s/ CRAIG J. TUTTLE

Craig J. Tuttle

Director, President and Chief Executive Officer (Principal Executive Officer)

/s/ BRETT L. FREVERT

Brett L. Frevert

Chief Financial Officer (Principal Financial Officer and Principal Accounting
Officer)

/s/ RODNEY S. MARKIN

Rodney S. Markin

Director

/s/ ANTONIUS P. SCHUH

Antonius P. Schuh

Director

/s/ ROBERT M. PATZIG

Robert M. Patzig

Director

/s/ DOIT L. KOPPLER II

Doit L. Koppler II

Director

33


EXHIBIT INDEX

3.1

Third Amended and Restated Certificate of Incorporation of the Registrant
(incorporated by reference to Exhibit 3.1 to Registrant’s Quarterly Report on
Form 10-Q filed on November 14, 2005).

3.2

Amended and Restated Bylaws of the Registrant 8-K (incorporated by reference
to Registrant’s Current Report on Form 8-K filed on the May 25, 2007).

4.1

Form of Certificate of the Registrant’s Common Stock (incorporated by
reference to Exhibit 4 to Registrant’s Registration Statement on Form S-1
(Registration No. 333-32174) filed on March 10, 2000).

4.2

Certificate of Designation of Series A Convertible Preferred Stock dated as
of December 28, 2010 (incorporated by reference to Exhibit 3.1 to Registrant’s
Current Report on Form 8-K filed on January 4, 2011).

5.1

Opinion of Husch Blackwell, LLP

*10.1

2006 Equity Incentive Plan of the Registrant (incorporated by reference to
Exhibit 4(b) to Registrant’s Registration Statement on Form S-8 (Registration
No. 333-139999) filed on January 16, 2007.

*10.2

1999 UK Approved Stock Option Sub Plan of the Registrant (incorporated by
reference to Exhibit 10.7 to Registrant’s Registration Statement on Form S-1
(Registration No. 333-32174) filed on March 10, 2000).

*10.3

Employment Agreement between the Company and Craig J. Tuttle dated July 12,
2006 (incorporated by reference to Exhibit 10.1 to Registrant’s Current Report
on Form 8-K filed on July 12, 2006.

*10.4

Amendment No. 1 to the Employment Agreement between the Company and Craig J.
Tuttle, effective July 12, 2006 (incorporated by reference to Exhibit 10.1 to
Registrant’s Quarterly Report on Form 10-Q filed on November 14, 2006).

10.5

License Agreement, dated September 1, 1994, between Registrant and Professor
Dr. Gunther Bonn, et. al. and Amendment thereto, dated March 14, 1997
(incorporated by reference to Exhibit 10.14 to Registrant’s Registration
Statement on Form S-1 (Registration No. 333-32174) filed on March 10, 2000).

10.6

License Agreement, dated August 20, 1997, between the Registrant and Leland
Stanford Junior University (incorporated by reference to Exhibit 10.15 to
Registrant’s Registration Statement on Form S-1 (Registration No. 333-32174)
filed on March 10, 2000).

10.7

License Agreement, dated December 1, 1989, between Cruachem Holdings Limited
(a wholly owned subsidiary of the Registrant) and Millipore Corporation
(incorporated by reference to Exhibit 10.13 to Registrant’s Annual Report on
Form 10-K filed on March 25, 2002).

10.8

Sublicense Agreement, dated October 1, 1991, between Cruachem Holdings
Limited (a wholly owned subsidiary of the Registrant) and Applied Biosystems,
Inc. (incorporated by reference to Exhibit 10.14 to Registrant’s Annual Report
on Form 10-K filed on March 25, 2002).

10.9

Missives, dated May 17, 2002, between Cruachem Limited (a wholly-owned
subsidiary of the Registrant) and Robinson Nugent (Scotland) Limited
(incorporated by reference to Exhibit 10.1 to Registrant’s Quarterly Report on
Form 10-Q filed on August 14, 2002).

10.10

License Amendment Agreement, dated June 2, 2003, by and between Geron
Corporation and the Registrant (incorporated by reference to Exhibit 10.2 to
Registrant’s Quarterly Report on Form 10-Q filed on August 12, 2003).

10.11

Supply Agreement, dated January 1, 2000, between the Registrant and Hitachi
Instruments (incorporated by reference to Exhibit 10.16 to Registrant’s
Registration Statement on Form S-1 (Registration No. 333-32174) filed on March
10, 2000).

10.12

Common Stock Purchase Warrant by and between the Registrant and Laurus Master
Fund, Ltd., dated December 3, 2003 (incorporated by reference to Exhibit 10.4 to
the Registration Statement on Form S-3 of the Registrant (Registration No.
333-111442) filed on December 22, 2003).

10.13

Registration Rights Agreement by and between the Registrant and Laurus Master
Fund, Ltd., dated December 3, 2003 (incorporated by reference to Exhibit 10.5 to
the Registration Statement on Form S-3 of the Registrant (Registration No.
333-111442) filed on December 22, 2003).

10.14

Securities Purchase Agreement by and between the Registrant and Laurus Master
Fund, Ltd., dated February 19, 2004, as amended on April 15, 2004 (incorporated
by reference to Exhibit 10.1 to the Registration Statement on Form S-3 of the
Registrant (Registration No. 333-114661) filed on April 21, 2004).

10.15

Amendment to Securities Purchase Agreement and Related Document by and
between the Registrant and Laurus Master Fund, Ltd., dated August 31, 2004
(incorporated by reference to Exhibit 10.1 to the Registration Statement on Form
S-3 of the Registrant (Registration No. 333-118970) filed on September 14,
2004).

10.16

Common Stock Purchase Warrant by and between the Registrant and Laurus Master
Fund, Ltd., dated February 19, 2004, as amended on April 15, 2004 (incorporated
by reference to Exhibit 10.3 to the Registration Statement on Form S-3 of the
Registrant (Registration No. 333-114661) filed on April 21, 2004).

10.17

Registration Rights Agreement by and between the Registrant and Laurus Master
Fund, Ltd., dated February 19, 2004 (incorporated by reference to Exhibit 10.4
to the Registration Statement on Form S-3 of the Registrant (Registration No.
333-114661) filed on April 21, 2004).

10.18

Common Stock Purchase Warrant by and between the Registrant and Laurus Master
Fund, Ltd., dated August 31, 2004 (incorporated by reference to Exhibit 10.3 to
the Registration Statement on Form S-3 of the Registrant (Registration No.
333-118970) filed on September 14, 2004).

34


10.19

Form of Securities Purchase Agreement by and between the Registrant and
various counter-parties dated September 22, 2005 (incorporated by reference to
Exhibit 10.1 to the Registrant’s Quarterly Report on Form 10-Q filed on November
14, 2005).

10.20

Common Stock Purchase Warrant by and between the Registrant and Oppenheimer
& Co., Inc. dated October 27, 2005 (incorporated by reference to Exhibit
10.34 to the Registrant’s Annual Report on Form 10-K filed on March 31, 2006).

10.21

Letter Agreement by and between the Registrant and Laurus Master Fund, Ltd.
dated October 31, 2005 (incorporated by reference to Exhibit 10.36 to the
Registrant’s Annual Report on Form 10-K filed on March 31, 2006).

*10.22

Employment Agreement Extension between the Company and Craig Tuttle dated
July 12, 2008 (incorporated by reference to Registrant’s Current Report on Form
8-K filed on July 16, 2008).

10.23

License Agreement between the Company and the Dana-Farber Cancer Institute
dated October 8, 2009 (incorporated by reference to Exhibit 10.1 to the
Registrant’s Quarterly Report on Form 10-Q filed on November 5, 2009).

10.24

License Agreement between the Company and Power3 Medical Products, Inc. dated
January 23, 2009 (incorporated by reference to Exhibit 10.2 to the Registrant’s
Quarterly Report on Form 10-Q filed on November 5, 2009).

+10.25

Asset Purchase Agreement, dated November 29, 2010, by and among PGxHealth,
LLC, Clinical Data, Inc. and Transgenomic, Inc. (incorporated by reference to
Exhibit 2.1 to the Registrant’s Current Report on Form 8-K filed on January 4,
2011).

+10.26

Amendment to Asset Purchase Agreement, dated December 29, 2010, by and among
PGxHealth, LLC, Clinical Data, Inc. and Transgenomic, Inc. (incorporated by
reference to Exhibit2.1 to the Registrant’s Current Report on Form 8-K filed on
January 4, 2011).

10.27

Series A Convertible Preferred Stock Purchase Agreement with Third Security
dated December 29, 2010 (incorporated by reference to Exhibit 4.1 to the
Registrant’s Current Report on Form 8-K filed on January 4, 2011).

10.28

Form of Series A Convertible Preferred Stock Warrant issued to Third Security
Senior Staff 2008 LLC, Third Security Staff 2010 LLC, and Third Security
Incentive 2010 LLC on December 29, 2010 (incorporated by reference to Exhibit
4.2 to the Registrant’s Current Report on Form 8-K filed on January 4, 2011).

10.29

Registration Rights Agreement, dated December 29, 2010, by and among
Transgenomic, Inc., Third Security Senior Staff 2008 LLC, Third Security Staff
2010 LLC, and Third Security Incentive 2010 LLC (incorporated by reference to
Exhibit 4.3 to the Registrant’s Current Report on Form 8-K filed on January 4,
2011).

10.30

Secured Promissory Note, issued December 29, 2010 by Transgenomic, Inc. in
favor of PGxHealth, LLC. (incorporated by reference to Exhibit 4.4 to the
Registrant’s Current Report on Form 8-K filed on January 4, 2011).

10.31

Secured Promissory Note, issued December 29, 2010 by Transgenomic, Inc. in
favor of PGxHealth, LLC. (incorporated by reference to Exhibit 4.5 to the
Registrant’s Current Report on Form 8-K filed on January 4, 2011).

10.32

Sublease Agreement, dated December 29, 2010, by and between Transgenomic,
Inc. and Clinical Data, Inc. (incorporated by reference to Exhibit 10.1 to the
Registrant’s Current Report on Form 8-K filed on January 4, 2011).

10.33

Noncompetition and Nonsolicitation Agreement, dated December 29, 2010, by and
among PGxHealth, LLC, Clinical Data, Inc. and Transgenomic, Inc. (incorporated
by reference to Exhibit 10.2 to the Registrant’s Current Report on Form 8-K
filed on January 4, 2011).

10.34

Security Agreement, dated December 29, 2010, by and between PGxHealth, LLC
and Transgenomic, Inc. (incorporated by reference to Exhibit 10.3 to the
Registrant’s Current Report on Form 8-K filed on January 4, 2011).

10.35

First Amendment to Registration Rights Agreement dated November 8, 2011
(incorporated by reference to Exhibit 4.2 to the Registrant’s Current Report on
Form 8-K filed on November 14, 2011).

10.36

Agreement Regarding Preferred Stock dated November 8, 2011 (incorporated by
reference to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K filed
on November 14, 2011).

10.37

Convertible Promissory Note Purchase Agreement by and among the Company;
Third Security Senior Staff 2008 LLC; Third Security Staff 2010 LLC; and Third
Security Incentive 2010 LLC dated December 30, 2011 (incorporated by reference
to Exhibit 10.1 to the Registrant’s Current Report on Form 8-K filed on January
6, 2012).

10.38

Convertible Promissory Note by and between Transgenomic, Inc. and Third
Security Senior Staff 2008 LLC dated December 30, 2011(incorporated by reference
to Exhibit 10.3 to the Registrant’s Current Report on Form 8-K filed on January
6, 2012).

10.39

Convertible Promissory Note by and between Transgenomic, Inc. and Third
Security Staff 2010 LLC dated December 30, 2011 (incorporated by reference to
Exhibit 10.4 to the Registrant’s Current Report on Form 8-K filed on January 6,
2012).

10.40

Convertible Promissory Note by and between Transgenomic, Inc. and Third
Security Incentive 2010 LLC dated December 30, 2011(incorporated by reference to
Exhibit 10.2 to the Registrant’s Current Report on Form 8-K filed on January 6,
2012).

35


10.41

Securities Purchase Agreement entered into by and among the Company and the
Investors dated February 2, 2012 (incorporated by reference to Exhibit 10.1 to
the Registrant’s Current Report on Form 8-K filed on February 7, 2012).

10.42

Form of Warrant issued by the Company to the Third Securities Entities on
February 7, 2012(incorporated by reference to Exhibit 10.2 to the Registrant’s
Current Report on Form 8-K filed on February 7, 2012).

10.43

Form of Warrant issued by the Company to the Investors on February 7, 2012
(incorporated by reference to Exhibit 10.3 to the Registrant’s Current Report on
Form 8-K filed on February 7, 2012).

10.44

Form of Registration Rights Agreement entered into by and among the Company,
the Third Securities Entities and the Investors dated February 2, 2012
(incorporated by reference to Exhibit 10.4 to the Registrant’s Current Report on
Form 8-K filed on February 7, 2012).

21.1

Subsidiaries of the Registrant

23.1

Consent of Independent Registered Public Accounting Firm

23.2

Consent of Husch Blackwell, LLP (included as part of Exhibit 5.1)

24.1

Power of Attorney (included as part of the signature page of the registration
statement on Form S-1)

*

Denotes exhibit that constitutes a management contract, or compensatory plan
or arrangement.

+

Confidential treatment has been granted with respect to certain portions of
this exhibit. Omitted portions have been filed separately with the SEC.

36

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